Gene : Glyma.09G048100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR32382:SF0 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 4 Genomic Order:  481
Name:  ? Glyma.09G048100 Secondary Identifier:  ? PAC:30486420
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G048100 0.5kb upstream 0.5kb upstream 3653 true Chr09: 4155557-4159209 Glycine max
Glyma.09G048100 0.5kb upstream 0.5kb upstream 500 false Chr09: 4155557-4156056 Glycine max
Glyma.09G048100 0.5kb downstream 0.5kb downstream 3653 true Chr09: 4156057-4159709 Glycine max
Glyma.09G048100 0.5kb downstream 0.5kb downstream 500 false Chr09: 4159210-4159709 Glycine max
Glyma.09G048100 1.0kb upstream 1.0kb upstream 4153 true Chr09: 4155057-4159209 Glycine max
Glyma.09G048100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 4155057-4156056 Glycine max
Glyma.09G048100 1.0kb downstream 1.0kb downstream 4153 true Chr09: 4156057-4160209 Glycine max
Glyma.09G048100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 4159210-4160209 Glycine max
Glyma.09G048100 2.0kb upstream 2.0kb upstream 5153 true Chr09: 4154057-4159209 Glycine max
Glyma.09G048100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 4154057-4156056 Glycine max
Glyma.09G048100 2.0kb downstream 2.0kb downstream 5153 true Chr09: 4156057-4161209 Glycine max
Glyma.09G048100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 4159210-4161209 Glycine max
Glyma.09G048100 5.0kb upstream 5.0kb upstream 8153 true Chr09: 4151057-4159209 Glycine max
Glyma.09G048100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 4151057-4156056 Glycine max
Glyma.09G048100 5.0kb downstream 5.0kb downstream 8153 true Chr09: 4156057-4164209 Glycine max
Glyma.09G048100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 4159210-4164209 Glycine max
Glyma.09G048100 10.0kb upstream 10.0kb upstream 13153 true Chr09: 4146057-4159209 Glycine max
Glyma.09G048100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 4146057-4156056 Glycine max
Glyma.09G048100 10.0kb downstream 10.0kb downstream 13153 true Chr09: 4156057-4169209 Glycine max
Glyma.09G048100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 4159210-4169209 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122249325 5265 Fabidae Singleton cluster - no MSA
123992775 5270 Rosid Singleton cluster - no MSA
123646719 5271 Pentapetalae View MSA
122795862 5272 Eudicot View MSA
122048693 5273 Angiosperm View MSA
121351509 5274 Embryophyte View MSA
123426561 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.17511 0.0 18.6278    
cufflinks 6.01821 0.0 23.5636    
cufflinks 4.17395 0.0 19.2122   Low
cufflinks 13.8811 0.0 50.2652   High
cufflinks 9.06884 0.0 35.6033    
cufflinks 7.08361 0.0 25.5149    
cufflinks 3.69016 0.0 16.6121   Low
cufflinks 11.0296 0.0 42.2194   High
cufflinks 5.81771 0.0 22.6912    
cufflinks 2.645       High
cufflinks 0.543       Low
cufflinks 0.83        
cufflinks 1.738       High
cufflinks 1.49        
cufflinks 1.854       High
cufflinks 1.078        
cufflinks 0.935        
cufflinks 0.963        
cufflinks 0.844        
cufflinks 1.106        
cufflinks 0.428       Low
cufflinks 0.98        
cufflinks 0.885        
cufflinks 0.284       Low
cufflinks 0.928        
cufflinks 0.934        

0 Strain