Gene : Glyma.09G049900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR14237:SF30 - MITOCHONDRIAL AMIDOXIME-REDUCING COMPONENT 1 Genomic Order:  499
Name:  ? Glyma.09G049900 Secondary Identifier:  ? PAC:30485584
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5963 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G049900 0.5kb upstream 0.5kb upstream 5234 true Chr09: 4345104-4350337 Glycine max
Glyma.09G049900 0.5kb upstream 0.5kb upstream 500 false Chr09: 4345104-4345603 Glycine max
Glyma.09G049900 0.5kb downstream 0.5kb downstream 5234 true Chr09: 4345604-4350837 Glycine max
Glyma.09G049900 0.5kb downstream 0.5kb downstream 500 false Chr09: 4350338-4350837 Glycine max
Glyma.09G049900 1.0kb upstream 1.0kb upstream 5734 true Chr09: 4344604-4350337 Glycine max
Glyma.09G049900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 4344604-4345603 Glycine max
Glyma.09G049900 1.0kb downstream 1.0kb downstream 5734 true Chr09: 4345604-4351337 Glycine max
Glyma.09G049900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 4350338-4351337 Glycine max
Glyma.09G049900 2.0kb upstream 2.0kb upstream 6734 true Chr09: 4343604-4350337 Glycine max
Glyma.09G049900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 4343604-4345603 Glycine max
Glyma.09G049900 2.0kb downstream 2.0kb downstream 6734 true Chr09: 4345604-4352337 Glycine max
Glyma.09G049900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 4350338-4352337 Glycine max
Glyma.09G049900 5.0kb upstream 5.0kb upstream 9734 true Chr09: 4340604-4350337 Glycine max
Glyma.09G049900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 4340604-4345603 Glycine max
Glyma.09G049900 5.0kb downstream 5.0kb downstream 9734 true Chr09: 4345604-4355337 Glycine max
Glyma.09G049900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 4350338-4355337 Glycine max
Glyma.09G049900 10.0kb upstream 10.0kb upstream 14734 true Chr09: 4335604-4350337 Glycine max
Glyma.09G049900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 4335604-4345603 Glycine max
Glyma.09G049900 10.0kb downstream 10.0kb downstream 14734 true Chr09: 4345604-4360337 Glycine max
Glyma.09G049900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 4350338-4360337 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311659 5265 Fabidae View MSA
124065334 5270 Rosid View MSA
123736927 5271 Pentapetalae View MSA
122792643 5272 Eudicot View MSA
122043484 5273 Angiosperm View MSA
123428941 5275 Viridiplantae View MSA
121347613 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.1599 0.0 62.1901 High  
cufflinks 13.6705 0.0 37.9144   Low
cufflinks 26.289 0.0 70.2631 High  
cufflinks 17.6474 0.0 47.9952    
cufflinks 19.9631 0.0 53.9467 High  
cufflinks 44.9105 0.0 120.412 High High
cufflinks 16.9874 0.0 46.4028    
cufflinks 17.1066 0.0 46.5447    
cufflinks 23.7713 0.0 63.7333 High  
cufflinks 4.911        
cufflinks 9.597     High High
cufflinks 7.028        
cufflinks 5.487        
cufflinks 4.857        
cufflinks 3.645       Low
cufflinks 4.615        
cufflinks 3.77       Low
cufflinks 5.511        
cufflinks 3.604       Low
cufflinks 5.941        
cufflinks 6.104     High  
cufflinks 4.976        
cufflinks 3.683       Low
cufflinks 8.706     High High
cufflinks 5.128        
cufflinks 6.61     High  

0 Strain