Gene : Glyma.09G050600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11785:SF267 - CATIONIC AMINO ACID TRANSPORTER 5 Genomic Order:  506
Name:  ? Glyma.09G050600 Secondary Identifier:  ? PAC:30484199
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G050600 0.5kb upstream 0.5kb upstream 2797 true Chr09: 4384885-4387681 Glycine max
Glyma.09G050600 0.5kb upstream 0.5kb upstream 500 false Chr09: 4387182-4387681 Glycine max
Glyma.09G050600 0.5kb downstream 0.5kb downstream 2797 true Chr09: 4384385-4387181 Glycine max
Glyma.09G050600 0.5kb downstream 0.5kb downstream 500 false Chr09: 4384385-4384884 Glycine max
Glyma.09G050600 1.0kb upstream 1.0kb upstream 3297 true Chr09: 4384885-4388181 Glycine max
Glyma.09G050600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 4387182-4388181 Glycine max
Glyma.09G050600 1.0kb downstream 1.0kb downstream 3297 true Chr09: 4383885-4387181 Glycine max
Glyma.09G050600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 4383885-4384884 Glycine max
Glyma.09G050600 2.0kb upstream 2.0kb upstream 4297 true Chr09: 4384885-4389181 Glycine max
Glyma.09G050600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 4387182-4389181 Glycine max
Glyma.09G050600 2.0kb downstream 2.0kb downstream 4297 true Chr09: 4382885-4387181 Glycine max
Glyma.09G050600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 4382885-4384884 Glycine max
Glyma.09G050600 5.0kb upstream 5.0kb upstream 7297 true Chr09: 4384885-4392181 Glycine max
Glyma.09G050600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 4387182-4392181 Glycine max
Glyma.09G050600 5.0kb downstream 5.0kb downstream 7297 true Chr09: 4379885-4387181 Glycine max
Glyma.09G050600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 4379885-4384884 Glycine max
Glyma.09G050600 10.0kb upstream 10.0kb upstream 12297 true Chr09: 4384885-4397181 Glycine max
Glyma.09G050600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 4387182-4397181 Glycine max
Glyma.09G050600 10.0kb downstream 10.0kb downstream 12297 true Chr09: 4374885-4387181 Glycine max
Glyma.09G050600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 4374885-4384884 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309119 5265 Fabidae View MSA
124065749 5270 Rosid View MSA
123753183 5271 Pentapetalae View MSA
122795315 5272 Eudicot View MSA
122045421 5273 Angiosperm View MSA
121350184 5274 Embryophyte View MSA
123428616 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.3067 0.0 43.5408   High
cufflinks 1.28471 0.0 4.34019    
cufflinks 4.59361 0.0 13.0357    
cufflinks 1.38677 0.0 4.63232    
cufflinks 1.68447 0.0 5.49991    
cufflinks 0.166338 0.0 0.6396 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.61559 0.0 5.28756    
cufflinks 3.82871 0.0 11.1296    
cufflinks 0.232        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.595        
cufflinks 0.057     Low  
cufflinks 0.045     Low Low
cufflinks 6.327     High High
cufflinks 1.208        
cufflinks 0.006     Low Low
cufflinks 2.175        
cufflinks 0.865        
cufflinks 1.524        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.623        
cufflinks 2.347        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.417        
cufflinks 0.01     Low Low

0 Strain