Gene : Glyma.09G050800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR32494:SF7 - ALLANTOATE DEIMINASE Genomic Order:  508
Name:  ? Glyma.09G050800 Secondary Identifier:  ? PAC:30485595
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5692 Glycine max pathologic  
Gmax PWY-5698 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G050800 0.5kb upstream 0.5kb upstream 5109 true Chr09: 4413615-4418723 Glycine max
Glyma.09G050800 0.5kb upstream 0.5kb upstream 500 false Chr09: 4418224-4418723 Glycine max
Glyma.09G050800 0.5kb downstream 0.5kb downstream 5109 true Chr09: 4413115-4418223 Glycine max
Glyma.09G050800 0.5kb downstream 0.5kb downstream 500 false Chr09: 4413115-4413614 Glycine max
Glyma.09G050800 1.0kb upstream 1.0kb upstream 5609 true Chr09: 4413615-4419223 Glycine max
Glyma.09G050800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 4418224-4419223 Glycine max
Glyma.09G050800 1.0kb downstream 1.0kb downstream 5609 true Chr09: 4412615-4418223 Glycine max
Glyma.09G050800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 4412615-4413614 Glycine max
Glyma.09G050800 2.0kb upstream 2.0kb upstream 6609 true Chr09: 4413615-4420223 Glycine max
Glyma.09G050800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 4418224-4420223 Glycine max
Glyma.09G050800 2.0kb downstream 2.0kb downstream 6609 true Chr09: 4411615-4418223 Glycine max
Glyma.09G050800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 4411615-4413614 Glycine max
Glyma.09G050800 5.0kb upstream 5.0kb upstream 9609 true Chr09: 4413615-4423223 Glycine max
Glyma.09G050800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 4418224-4423223 Glycine max
Glyma.09G050800 5.0kb downstream 5.0kb downstream 9609 true Chr09: 4408615-4418223 Glycine max
Glyma.09G050800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 4408615-4413614 Glycine max
Glyma.09G050800 10.0kb upstream 10.0kb upstream 14609 true Chr09: 4413615-4428223 Glycine max
Glyma.09G050800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 4418224-4428223 Glycine max
Glyma.09G050800 10.0kb downstream 10.0kb downstream 14609 true Chr09: 4403615-4418223 Glycine max
Glyma.09G050800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 4403615-4413614 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303466 5265 Fabidae View MSA
124067996 5270 Rosid View MSA
123737460 5271 Pentapetalae View MSA
122786407 5272 Eudicot View MSA
122042851 5273 Angiosperm View MSA
121347111 5274 Embryophyte View MSA
123424099 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 121.801 0.0 764.047 High High
cufflinks 41.2415 0.0 190.077 High  
cufflinks 45.0613 0.0 216.119 High  
cufflinks 47.9165 0.0 231.081 High  
cufflinks 19.1816 0.0 80.4201    
cufflinks 7.26388 0.0 33.5074   Low
cufflinks 38.3261 0.0 173.882 High  
cufflinks 26.4021 0.0 112.855 High  
cufflinks 25.5095 0.0 108.723 High  
cufflinks 5.125        
cufflinks 1.465       Low
cufflinks 3.989        
cufflinks 2.823        
cufflinks 3.731        
cufflinks 1.348       Low
cufflinks 14.083     High High
cufflinks 1.262       Low
cufflinks 5.096        
cufflinks 5.008        
cufflinks 20.509     High High
cufflinks 2.274        
cufflinks 20.216     High High
cufflinks 8.526     High  
cufflinks 2.97        
cufflinks 17.075     High High
cufflinks 1.551       Low

0 Strain