Gene : Glyma.09G054200 G. max Wm82.a2.v1
Defline:  (1 of 56) PF12796//PF13962 - Ankyrin repeats (3 copies) (Ank_2) // Domain of unknown function (PGG) Genomic Order:  542
Name:  ? Glyma.09G054200 Secondary Identifier:  ? PAC:30484671
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G054200 0.5kb upstream 0.5kb upstream 8558 true Chr09: 4790296-4798853 Glycine max
Glyma.09G054200 0.5kb upstream 0.5kb upstream 500 false Chr09: 4798354-4798853 Glycine max
Glyma.09G054200 0.5kb downstream 0.5kb downstream 8558 true Chr09: 4789796-4798353 Glycine max
Glyma.09G054200 0.5kb downstream 0.5kb downstream 500 false Chr09: 4789796-4790295 Glycine max
Glyma.09G054200 1.0kb upstream 1.0kb upstream 9058 true Chr09: 4790296-4799353 Glycine max
Glyma.09G054200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 4798354-4799353 Glycine max
Glyma.09G054200 1.0kb downstream 1.0kb downstream 9058 true Chr09: 4789296-4798353 Glycine max
Glyma.09G054200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 4789296-4790295 Glycine max
Glyma.09G054200 2.0kb upstream 2.0kb upstream 10058 true Chr09: 4790296-4800353 Glycine max
Glyma.09G054200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 4798354-4800353 Glycine max
Glyma.09G054200 2.0kb downstream 2.0kb downstream 10058 true Chr09: 4788296-4798353 Glycine max
Glyma.09G054200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 4788296-4790295 Glycine max
Glyma.09G054200 5.0kb upstream 5.0kb upstream 13058 true Chr09: 4790296-4803353 Glycine max
Glyma.09G054200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 4798354-4803353 Glycine max
Glyma.09G054200 5.0kb downstream 5.0kb downstream 13058 true Chr09: 4785296-4798353 Glycine max
Glyma.09G054200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 4785296-4790295 Glycine max
Glyma.09G054200 10.0kb upstream 10.0kb upstream 18058 true Chr09: 4790296-4808353 Glycine max
Glyma.09G054200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 4798354-4808353 Glycine max
Glyma.09G054200 10.0kb downstream 10.0kb downstream 18058 true Chr09: 4780296-4798353 Glycine max
Glyma.09G054200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 4780296-4790295 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310241 5265 Fabidae View MSA
124074259 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.759 0.0 73.0037 High  
cufflinks 9.07077 0.0 24.4272    
cufflinks 17.3145 0.0 46.3185    
cufflinks 7.13578 0.0 19.4649    
cufflinks 1.3743 0.0 4.59051    
cufflinks 0.317377 0.0 1.18427    
cufflinks 0.0167286 0.0 0.0720487 Low Low
cufflinks 11.3424 0.0 30.3172    
cufflinks 3.54188 0.0 10.364    
cufflinks 3.849        
cufflinks 0.438       Low
cufflinks 8.429     High  
cufflinks 1.144        
cufflinks 0.111       Low
cufflinks 0.288       Low
cufflinks 11.14     High  
cufflinks 1.276        
cufflinks 11.839     High High
cufflinks 5.654        
cufflinks 9.45     High  
cufflinks 0.509        
cufflinks 12.37     High High
cufflinks 12.942     High High
cufflinks 0.702        
cufflinks 8.258     High  
cufflinks 0.803        

0 Strain