Gene : Glyma.09G040600 G. max Wm82.a2.v1
Defline:  (1 of 39) PF00407 - Pathogenesis-related protein Bet v I family (Bet_v_1) Genomic Order:  406
Name:  ? Glyma.09G040600 Secondary Identifier:  ? PAC:30484647
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G040600 0.5kb upstream 0.5kb upstream 2981 true Chr09: 3385440-3388420 Glycine max
Glyma.09G040600 0.5kb upstream 0.5kb upstream 500 false Chr09: 3385440-3385939 Glycine max
Glyma.09G040600 0.5kb downstream 0.5kb downstream 2981 true Chr09: 3385940-3388920 Glycine max
Glyma.09G040600 0.5kb downstream 0.5kb downstream 500 false Chr09: 3388421-3388920 Glycine max
Glyma.09G040600 1.0kb upstream 1.0kb upstream 3481 true Chr09: 3384940-3388420 Glycine max
Glyma.09G040600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 3384940-3385939 Glycine max
Glyma.09G040600 1.0kb downstream 1.0kb downstream 3481 true Chr09: 3385940-3389420 Glycine max
Glyma.09G040600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 3388421-3389420 Glycine max
Glyma.09G040600 2.0kb upstream 2.0kb upstream 4481 true Chr09: 3383940-3388420 Glycine max
Glyma.09G040600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 3383940-3385939 Glycine max
Glyma.09G040600 2.0kb downstream 2.0kb downstream 4481 true Chr09: 3385940-3390420 Glycine max
Glyma.09G040600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 3388421-3390420 Glycine max
Glyma.09G040600 5.0kb upstream 5.0kb upstream 7481 true Chr09: 3380940-3388420 Glycine max
Glyma.09G040600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 3380940-3385939 Glycine max
Glyma.09G040600 5.0kb downstream 5.0kb downstream 7481 true Chr09: 3385940-3393420 Glycine max
Glyma.09G040600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 3388421-3393420 Glycine max
Glyma.09G040600 10.0kb upstream 10.0kb upstream 12481 true Chr09: 3375940-3388420 Glycine max
Glyma.09G040600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 3375940-3385939 Glycine max
Glyma.09G040600 10.0kb downstream 10.0kb downstream 12481 true Chr09: 3385940-3398420 Glycine max
Glyma.09G040600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 3388421-3398420 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315508 5265 Fabidae View MSA
124072279 5270 Rosid View MSA
123752390 5271 Pentapetalae View MSA
122797871 5272 Eudicot View MSA
122048225 5273 Angiosperm View MSA
121351454 5274 Embryophyte View MSA
123382173 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 55.0691 0.0 147.763 High  
cufflinks 0.183435 0.0 0.730935 Low Low
cufflinks 10.6886 0.0 31.028    
cufflinks 8.5915 0.0 25.6683    
cufflinks 247.151 0.0 791.437 High High
cufflinks 115.073 0.0 326.728 High  
cufflinks 0.116366 0.0 0.47203 Low Low
cufflinks 3.10563 0.0 10.6297    
cufflinks 196.735 0.0 605.525 High High
cufflinks 0.81        
cufflinks 77.408     High High
cufflinks 4.032        
cufflinks 79.652     High High
cufflinks 14.924     High  
cufflinks 16.654     High  
cufflinks 0.133       Low
cufflinks 142.695     High High
cufflinks 0.207       Low
cufflinks 1.31        
cufflinks 0.108       Low
cufflinks 64.872     High  
cufflinks 0.39        
cufflinks 0.281        
cufflinks 176.722     High High
cufflinks 0.165       Low
cufflinks 95.401     High High

0 Strain