Gene : Glyma.09G041500 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  415
Name:  ? Glyma.09G041500 Secondary Identifier:  ? PAC:30484940
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G041500 0.5kb upstream 0.5kb upstream 2935 true Chr09: 3488395-3491329 Glycine max
Glyma.09G041500 0.5kb upstream 0.5kb upstream 500 false Chr09: 3490830-3491329 Glycine max
Glyma.09G041500 0.5kb downstream 0.5kb downstream 2935 true Chr09: 3487895-3490829 Glycine max
Glyma.09G041500 0.5kb downstream 0.5kb downstream 500 false Chr09: 3487895-3488394 Glycine max
Glyma.09G041500 1.0kb upstream 1.0kb upstream 3435 true Chr09: 3488395-3491829 Glycine max
Glyma.09G041500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 3490830-3491829 Glycine max
Glyma.09G041500 1.0kb downstream 1.0kb downstream 3435 true Chr09: 3487395-3490829 Glycine max
Glyma.09G041500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 3487395-3488394 Glycine max
Glyma.09G041500 2.0kb upstream 2.0kb upstream 4435 true Chr09: 3488395-3492829 Glycine max
Glyma.09G041500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 3490830-3492829 Glycine max
Glyma.09G041500 2.0kb downstream 2.0kb downstream 4435 true Chr09: 3486395-3490829 Glycine max
Glyma.09G041500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 3486395-3488394 Glycine max
Glyma.09G041500 5.0kb upstream 5.0kb upstream 7435 true Chr09: 3488395-3495829 Glycine max
Glyma.09G041500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 3490830-3495829 Glycine max
Glyma.09G041500 5.0kb downstream 5.0kb downstream 7435 true Chr09: 3483395-3490829 Glycine max
Glyma.09G041500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 3483395-3488394 Glycine max
Glyma.09G041500 10.0kb upstream 10.0kb upstream 12435 true Chr09: 3488395-3500829 Glycine max
Glyma.09G041500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 3490830-3500829 Glycine max
Glyma.09G041500 10.0kb downstream 10.0kb downstream 12435 true Chr09: 3478395-3490829 Glycine max
Glyma.09G041500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 3478395-3488394 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304702 5265 Fabidae View MSA
124065952 5270 Rosid View MSA
123736884 5271 Pentapetalae View MSA
122769881 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.9537 0.0 40.6445    
cufflinks 6.09684 0.0 18.2547   Low
cufflinks 33.1197 0.0 88.4203 High  
cufflinks 8.80704 0.0 25.1158   Low
cufflinks 43.9085 0.0 118.738 High  
cufflinks 82.4487 0.0 235.245 High High
cufflinks 24.306 0.0 64.886 High  
cufflinks 51.468 0.0 140.245 High  
cufflinks 78.8612 0.0 223.71 High High
cufflinks 13.437     High  
cufflinks 21.281     High High
cufflinks 11.356     High  
cufflinks 16.784     High  
cufflinks 6.797     High  
cufflinks 17.63     High  
cufflinks 2.602       Low
cufflinks 13.701     High  
cufflinks 14.694     High  
cufflinks 2.958       Low
cufflinks 2.398       Low
cufflinks 26.522     High High
cufflinks 2.113       Low
cufflinks 2.362       Low
cufflinks 23.69     High High
cufflinks 2.103       Low
cufflinks 13.555     High  

0 Strain