Gene : Glyma.09G043800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR19923 - WD40 REPEAT PROTEINPRL1/PRL2-RELATED Genomic Order:  438
Name:  ? Glyma.09G043800 Secondary Identifier:  ? PAC:30484445
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G043800 0.5kb upstream 0.5kb upstream 6710 true Chr09: 3724972-3731681 Glycine max
Glyma.09G043800 0.5kb upstream 0.5kb upstream 500 false Chr09: 3731182-3731681 Glycine max
Glyma.09G043800 0.5kb downstream 0.5kb downstream 6710 true Chr09: 3724472-3731181 Glycine max
Glyma.09G043800 0.5kb downstream 0.5kb downstream 500 false Chr09: 3724472-3724971 Glycine max
Glyma.09G043800 1.0kb upstream 1.0kb upstream 7210 true Chr09: 3724972-3732181 Glycine max
Glyma.09G043800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 3731182-3732181 Glycine max
Glyma.09G043800 1.0kb downstream 1.0kb downstream 7210 true Chr09: 3723972-3731181 Glycine max
Glyma.09G043800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 3723972-3724971 Glycine max
Glyma.09G043800 2.0kb upstream 2.0kb upstream 8210 true Chr09: 3724972-3733181 Glycine max
Glyma.09G043800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 3731182-3733181 Glycine max
Glyma.09G043800 2.0kb downstream 2.0kb downstream 8210 true Chr09: 3722972-3731181 Glycine max
Glyma.09G043800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 3722972-3724971 Glycine max
Glyma.09G043800 5.0kb upstream 5.0kb upstream 11210 true Chr09: 3724972-3736181 Glycine max
Glyma.09G043800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 3731182-3736181 Glycine max
Glyma.09G043800 5.0kb downstream 5.0kb downstream 11210 true Chr09: 3719972-3731181 Glycine max
Glyma.09G043800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 3719972-3724971 Glycine max
Glyma.09G043800 10.0kb upstream 10.0kb upstream 16210 true Chr09: 3724972-3741181 Glycine max
Glyma.09G043800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 3731182-3741181 Glycine max
Glyma.09G043800 10.0kb downstream 10.0kb downstream 16210 true Chr09: 3714972-3731181 Glycine max
Glyma.09G043800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 3714972-3724971 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305740 5265 Fabidae View MSA
124068732 5270 Rosid View MSA
123753307 5271 Pentapetalae View MSA
122797815 5272 Eudicot View MSA
122050667 5273 Angiosperm View MSA
121343955 5274 Embryophyte View MSA
123424287 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.3581 0.0 68.4249 High  
cufflinks 24.1769 0.0 65.0747 High  
cufflinks 15.0745 0.0 40.2198   Low
cufflinks 21.1038 0.0 56.5535 High  
cufflinks 26.4709 0.0 71.6482 High High
cufflinks 21.6536 0.0 58.0642    
cufflinks 25.7473 0.0 69.5477 High  
cufflinks 19.4373 0.0 51.978    
cufflinks 20.5453 0.0 55.0119 High  
cufflinks 5.578        
cufflinks 3.083       Low
cufflinks 5.279        
cufflinks 8.677     High High
cufflinks 10.48     High High
cufflinks 3.624       Low
cufflinks 7.924     High  
cufflinks 4.13        
cufflinks 6.188        
cufflinks 7.818     High  
cufflinks 8.59     High High
cufflinks 4.286        
cufflinks 7.909     High  
cufflinks 6.753        
cufflinks 3.883       Low
cufflinks 7.837     High  
cufflinks 4.396        

0 Strain