Gene : Glyma.09G043900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22844//PTHR22844:SF235 - F-BOX AND WD40 DOMAIN PROTEIN Genomic Order:  439
Name:  ? Glyma.09G043900 Secondary Identifier:  ? PAC:30483039
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G043900 0.5kb upstream 0.5kb upstream 11128 true Chr09: 3735158-3746285 Glycine max
Glyma.09G043900 0.5kb upstream 0.5kb upstream 500 false Chr09: 3745786-3746285 Glycine max
Glyma.09G043900 0.5kb downstream 0.5kb downstream 11128 true Chr09: 3734658-3745785 Glycine max
Glyma.09G043900 0.5kb downstream 0.5kb downstream 500 false Chr09: 3734658-3735157 Glycine max
Glyma.09G043900 1.0kb upstream 1.0kb upstream 11628 true Chr09: 3735158-3746785 Glycine max
Glyma.09G043900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 3745786-3746785 Glycine max
Glyma.09G043900 1.0kb downstream 1.0kb downstream 11628 true Chr09: 3734158-3745785 Glycine max
Glyma.09G043900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 3734158-3735157 Glycine max
Glyma.09G043900 2.0kb upstream 2.0kb upstream 12628 true Chr09: 3735158-3747785 Glycine max
Glyma.09G043900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 3745786-3747785 Glycine max
Glyma.09G043900 2.0kb downstream 2.0kb downstream 12628 true Chr09: 3733158-3745785 Glycine max
Glyma.09G043900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 3733158-3735157 Glycine max
Glyma.09G043900 5.0kb upstream 5.0kb upstream 15628 true Chr09: 3735158-3750785 Glycine max
Glyma.09G043900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 3745786-3750785 Glycine max
Glyma.09G043900 5.0kb downstream 5.0kb downstream 15628 true Chr09: 3730158-3745785 Glycine max
Glyma.09G043900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 3730158-3735157 Glycine max
Glyma.09G043900 10.0kb upstream 10.0kb upstream 20628 true Chr09: 3735158-3755785 Glycine max
Glyma.09G043900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 3745786-3755785 Glycine max
Glyma.09G043900 10.0kb downstream 10.0kb downstream 20628 true Chr09: 3725158-3745785 Glycine max
Glyma.09G043900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 3725158-3735157 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301075 5265 Fabidae View MSA
124069728 5270 Rosid View MSA
123741699 5271 Pentapetalae View MSA
122795332 5272 Eudicot View MSA
122049229 5273 Angiosperm View MSA
121348338 5274 Embryophyte View MSA
123380824 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.47999 0.0 1.94056    
cufflinks 1.03491 0.0 4.35327    
cufflinks 0.136007 0.0 0.871654 Low Low
cufflinks 7.08143 0.0 21.0342   High
cufflinks 0.316384 0.0 1.39131    
cufflinks 0.0752852 0.0 0.524108 Low Low
cufflinks 3.1461 0.0 11.5474    
cufflinks 1.09295 0.0 4.49958    
cufflinks 1.5678 0.0 5.80531    
cufflinks 0.315        
cufflinks 0.014     Low Low
cufflinks 0.194        
cufflinks 0.084     Low  
cufflinks 0.058     Low  
cufflinks 0.05     Low  
cufflinks 4.403       High
cufflinks 0.029     Low Low
cufflinks 0.82        
cufflinks 0.4        
cufflinks 4.997       High
cufflinks 0.041     Low  
cufflinks 3.814       High
cufflinks 1.67        
cufflinks 0.022     Low Low
cufflinks 4.874       High
cufflinks 0.034     Low  

0 Strain