Gene : Glyma.09G044200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11991 - TRANSLATIONALLY CONTROLLED TUMOR PROTEIN-RELATED Genomic Order:  442
Name:  ? Glyma.09G044200 Secondary Identifier:  ? PAC:30484278
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G044200 0.5kb upstream 0.5kb upstream 2686 true Chr09: 3772064-3774749 Glycine max
Glyma.09G044200 0.5kb upstream 0.5kb upstream 500 false Chr09: 3772064-3772563 Glycine max
Glyma.09G044200 0.5kb downstream 0.5kb downstream 2686 true Chr09: 3772564-3775249 Glycine max
Glyma.09G044200 0.5kb downstream 0.5kb downstream 500 false Chr09: 3774750-3775249 Glycine max
Glyma.09G044200 1.0kb upstream 1.0kb upstream 3186 true Chr09: 3771564-3774749 Glycine max
Glyma.09G044200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 3771564-3772563 Glycine max
Glyma.09G044200 1.0kb downstream 1.0kb downstream 3186 true Chr09: 3772564-3775749 Glycine max
Glyma.09G044200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 3774750-3775749 Glycine max
Glyma.09G044200 2.0kb upstream 2.0kb upstream 4186 true Chr09: 3770564-3774749 Glycine max
Glyma.09G044200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 3770564-3772563 Glycine max
Glyma.09G044200 2.0kb downstream 2.0kb downstream 4186 true Chr09: 3772564-3776749 Glycine max
Glyma.09G044200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 3774750-3776749 Glycine max
Glyma.09G044200 5.0kb upstream 5.0kb upstream 7186 true Chr09: 3767564-3774749 Glycine max
Glyma.09G044200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 3767564-3772563 Glycine max
Glyma.09G044200 5.0kb downstream 5.0kb downstream 7186 true Chr09: 3772564-3779749 Glycine max
Glyma.09G044200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 3774750-3779749 Glycine max
Glyma.09G044200 10.0kb upstream 10.0kb upstream 12186 true Chr09: 3762564-3774749 Glycine max
Glyma.09G044200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 3762564-3772563 Glycine max
Glyma.09G044200 10.0kb downstream 10.0kb downstream 12186 true Chr09: 3772564-3784749 Glycine max
Glyma.09G044200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 3774750-3784749 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297933 5265 Fabidae View MSA
124072412 5270 Rosid View MSA
123743771 5271 Pentapetalae View MSA
122796056 5272 Eudicot View MSA
122046002 5273 Angiosperm View MSA
121343936 5274 Embryophyte View MSA
123424738 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 829.793 0.0 4108.06 High  
cufflinks 1190.75 0.0 6894.87 High  
cufflinks 878.544 0.0 4501.93 High  
cufflinks 1541.04 0.0 10052.2 High  
cufflinks 1673.52 0.0 11267.6 High  
cufflinks 930.865 0.0 4860.72 High  
cufflinks 5600.36 5579.29 5621.42 High High
cufflinks 1568.11 0.0 10246.0 High  
cufflinks 1465.04 0.0 9322.14 High  
cufflinks 494.892     High  
cufflinks 487.215     High  
cufflinks 439.187     High  
cufflinks 402.386     High  
cufflinks 621.516     High High
cufflinks 524.943     High  
cufflinks 297.206     High Low
cufflinks 477.026     High  
cufflinks 908.544     High High
cufflinks 392.658     High  
cufflinks 334.442     High  
cufflinks 432.105     High  
cufflinks 322.024     High  
cufflinks 288.816     High Low
cufflinks 449.049     High  
cufflinks 321.587     High  
cufflinks 349.218     High  

0 Strain