Gene : Glyma.09G044400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12606:SF39 - UBIQUITIN-LIKE-SPECIFIC PROTEASE ESD4-RELATED Genomic Order:  444
Name:  ? Glyma.09G044400 Secondary Identifier:  ? PAC:30485521
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G044400 0.5kb upstream 0.5kb upstream 5849 true Chr09: 3793019-3798867 Glycine max
Glyma.09G044400 0.5kb upstream 0.5kb upstream 500 false Chr09: 3798368-3798867 Glycine max
Glyma.09G044400 0.5kb downstream 0.5kb downstream 5849 true Chr09: 3792519-3798367 Glycine max
Glyma.09G044400 0.5kb downstream 0.5kb downstream 500 false Chr09: 3792519-3793018 Glycine max
Glyma.09G044400 1.0kb upstream 1.0kb upstream 6349 true Chr09: 3793019-3799367 Glycine max
Glyma.09G044400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 3798368-3799367 Glycine max
Glyma.09G044400 1.0kb downstream 1.0kb downstream 6349 true Chr09: 3792019-3798367 Glycine max
Glyma.09G044400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 3792019-3793018 Glycine max
Glyma.09G044400 2.0kb upstream 2.0kb upstream 7349 true Chr09: 3793019-3800367 Glycine max
Glyma.09G044400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 3798368-3800367 Glycine max
Glyma.09G044400 2.0kb downstream 2.0kb downstream 7349 true Chr09: 3791019-3798367 Glycine max
Glyma.09G044400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 3791019-3793018 Glycine max
Glyma.09G044400 5.0kb upstream 5.0kb upstream 10349 true Chr09: 3793019-3803367 Glycine max
Glyma.09G044400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 3798368-3803367 Glycine max
Glyma.09G044400 5.0kb downstream 5.0kb downstream 10349 true Chr09: 3788019-3798367 Glycine max
Glyma.09G044400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 3788019-3793018 Glycine max
Glyma.09G044400 10.0kb upstream 10.0kb upstream 15349 true Chr09: 3793019-3808367 Glycine max
Glyma.09G044400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 3798368-3808367 Glycine max
Glyma.09G044400 10.0kb downstream 10.0kb downstream 15349 true Chr09: 3783019-3798367 Glycine max
Glyma.09G044400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 3783019-3793018 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311892 5265 Fabidae View MSA
124062657 5270 Rosid View MSA
123737823 5271 Pentapetalae View MSA
122797734 5272 Eudicot View MSA
122046617 5273 Angiosperm View MSA
121348677 5274 Embryophyte View MSA
123380965 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.93617 0.0 13.8364    
cufflinks 5.40093 0.0 15.0415    
cufflinks 6.01058 0.0 16.574    
cufflinks 7.04721 0.0 19.2028   High
cufflinks 3.65003 0.0 10.5875   Low
cufflinks 5.02247 0.0 14.0595    
cufflinks 5.61152 0.0 15.5485    
cufflinks 5.63406 0.0 15.6368    
cufflinks 5.02391 0.0 14.0811    
cufflinks 2.061        
cufflinks 1.104       Low
cufflinks 3.51       High
cufflinks 1.805        
cufflinks 1.741        
cufflinks 1.15       Low
cufflinks 2.783        
cufflinks 1.285        
cufflinks 3.903       High
cufflinks 2.836        
cufflinks 3.108        
cufflinks 1.049       Low
cufflinks 3.192        
cufflinks 3.047        
cufflinks 1.502        
cufflinks 2.736        
cufflinks 1.148       Low

0 Strain