Gene : Glyma.09G044800 G. max Wm82.a2.v1
Defline:  (1 of 23) 2.4.2.39 - Xyloglucan 6-xylosyltransferase / Xyloglucan 6-alpha-D-xylosyltransferase Genomic Order:  448
Name:  ? Glyma.09G044800 Secondary Identifier:  ? PAC:30485934
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5936 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G044800 0.5kb upstream 0.5kb upstream 3047 true Chr09: 3840288-3843334 Glycine max
Glyma.09G044800 0.5kb upstream 0.5kb upstream 500 false Chr09: 3842835-3843334 Glycine max
Glyma.09G044800 0.5kb downstream 0.5kb downstream 3047 true Chr09: 3839788-3842834 Glycine max
Glyma.09G044800 0.5kb downstream 0.5kb downstream 500 false Chr09: 3839788-3840287 Glycine max
Glyma.09G044800 1.0kb upstream 1.0kb upstream 3547 true Chr09: 3840288-3843834 Glycine max
Glyma.09G044800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 3842835-3843834 Glycine max
Glyma.09G044800 1.0kb downstream 1.0kb downstream 3547 true Chr09: 3839288-3842834 Glycine max
Glyma.09G044800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 3839288-3840287 Glycine max
Glyma.09G044800 2.0kb upstream 2.0kb upstream 4547 true Chr09: 3840288-3844834 Glycine max
Glyma.09G044800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 3842835-3844834 Glycine max
Glyma.09G044800 2.0kb downstream 2.0kb downstream 4547 true Chr09: 3838288-3842834 Glycine max
Glyma.09G044800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 3838288-3840287 Glycine max
Glyma.09G044800 5.0kb upstream 5.0kb upstream 7547 true Chr09: 3840288-3847834 Glycine max
Glyma.09G044800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 3842835-3847834 Glycine max
Glyma.09G044800 5.0kb downstream 5.0kb downstream 7547 true Chr09: 3835288-3842834 Glycine max
Glyma.09G044800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 3835288-3840287 Glycine max
Glyma.09G044800 10.0kb upstream 10.0kb upstream 12547 true Chr09: 3840288-3852834 Glycine max
Glyma.09G044800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 3842835-3852834 Glycine max
Glyma.09G044800 10.0kb downstream 10.0kb downstream 12547 true Chr09: 3830288-3842834 Glycine max
Glyma.09G044800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 3830288-3840287 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311816 5265 Fabidae View MSA
124064369 5270 Rosid View MSA
123736946 5271 Pentapetalae View MSA
122789380 5272 Eudicot View MSA
122042255 5273 Angiosperm View MSA
121349054 5274 Embryophyte View MSA
123428220 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.90695 0.0 31.7501    
cufflinks 7.31149 0.0 27.4874    
cufflinks 7.95052 0.0 25.1804    
cufflinks 11.4322 0.0 39.6684    
cufflinks 18.2842 0.0 62.6079    
cufflinks 29.2374 0.0 104.213 High High
cufflinks 6.13893 0.0 20.1884   Low
cufflinks 15.7492 0.0 46.7237    
cufflinks 12.2611 0.0 42.5794    
cufflinks 33.242     High High
cufflinks 16.651     High  
cufflinks 10.514     High  
cufflinks 11.324     High  
cufflinks 10.556     High  
cufflinks 45.526     High High
cufflinks 6.85        
cufflinks 68.605     High High
cufflinks 13.089     High  
cufflinks 4.964       Low
cufflinks 5.271       Low
cufflinks 7.518     High  
cufflinks 5.889        
cufflinks 6.953        
cufflinks 8.394     High  
cufflinks 5.181       Low
cufflinks 23.303     High  

0 Strain