Gene : Glyma.09G046300 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR23336:SF14 - CW-TYPE ZINC-FINGER PROTEIN Genomic Order:  463
Name:  ? Glyma.09G046300 Secondary Identifier:  ? PAC:30486657
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G046300 0.5kb upstream 0.5kb upstream 9612 true Chr09: 3967564-3977175 Glycine max
Glyma.09G046300 0.5kb upstream 0.5kb upstream 500 false Chr09: 3967564-3968063 Glycine max
Glyma.09G046300 0.5kb downstream 0.5kb downstream 9612 true Chr09: 3968064-3977675 Glycine max
Glyma.09G046300 0.5kb downstream 0.5kb downstream 500 false Chr09: 3977176-3977675 Glycine max
Glyma.09G046300 1.0kb upstream 1.0kb upstream 10112 true Chr09: 3967064-3977175 Glycine max
Glyma.09G046300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 3967064-3968063 Glycine max
Glyma.09G046300 1.0kb downstream 1.0kb downstream 10112 true Chr09: 3968064-3978175 Glycine max
Glyma.09G046300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 3977176-3978175 Glycine max
Glyma.09G046300 2.0kb upstream 2.0kb upstream 11112 true Chr09: 3966064-3977175 Glycine max
Glyma.09G046300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 3966064-3968063 Glycine max
Glyma.09G046300 2.0kb downstream 2.0kb downstream 11112 true Chr09: 3968064-3979175 Glycine max
Glyma.09G046300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 3977176-3979175 Glycine max
Glyma.09G046300 5.0kb upstream 5.0kb upstream 14112 true Chr09: 3963064-3977175 Glycine max
Glyma.09G046300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 3963064-3968063 Glycine max
Glyma.09G046300 5.0kb downstream 5.0kb downstream 14112 true Chr09: 3968064-3982175 Glycine max
Glyma.09G046300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 3977176-3982175 Glycine max
Glyma.09G046300 10.0kb upstream 10.0kb upstream 19112 true Chr09: 3958064-3977175 Glycine max
Glyma.09G046300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 3958064-3968063 Glycine max
Glyma.09G046300 10.0kb downstream 10.0kb downstream 19112 true Chr09: 3968064-3987175 Glycine max
Glyma.09G046300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 3977176-3987175 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304072 5265 Fabidae View MSA
124070830 5270 Rosid View MSA
123751363 5271 Pentapetalae View MSA
122792516 5272 Eudicot View MSA
122044427 5273 Angiosperm View MSA
121345237 5274 Embryophyte View MSA
123380178 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.57227 0.0 5.41204    
cufflinks 1.12833 0.0 5.13    
cufflinks 1.61393 0.0 5.46143   High
cufflinks 1.34303 0.0 4.78122    
cufflinks 0.996237 0.0 3.95674   Low
cufflinks 1.0428 0.0 3.13255   Low
cufflinks 1.65911 0.0 5.69615   High
cufflinks 1.36696 0.0 4.8577    
cufflinks 1.34501 0.0 5.88502    
cufflinks 0.571        
cufflinks 0.334       Low
cufflinks 0.887       High
cufflinks 0.679        
cufflinks 0.564        
cufflinks 0.406        
cufflinks 0.437        
cufflinks 0.253       Low
cufflinks 0.845       High
cufflinks 0.724       High
cufflinks 0.416        
cufflinks 0.389        
cufflinks 0.475        
cufflinks 0.478        
cufflinks 0.573        
cufflinks 0.428        
cufflinks 0.428        

0 Strain