Gene : Glyma.09G038600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR30620:SF50 - BETA-D-XYLOSIDASE 1 Genomic Order:  386
Name:  ? Glyma.09G038600 Secondary Identifier:  ? PAC:30484856
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G038600 0.5kb upstream 0.5kb upstream 7220 true Chr09: 3235972-3243191 Glycine max
Glyma.09G038600 0.5kb upstream 0.5kb upstream 500 false Chr09: 3235972-3236471 Glycine max
Glyma.09G038600 0.5kb downstream 0.5kb downstream 7220 true Chr09: 3236472-3243691 Glycine max
Glyma.09G038600 0.5kb downstream 0.5kb downstream 500 false Chr09: 3243192-3243691 Glycine max
Glyma.09G038600 1.0kb upstream 1.0kb upstream 7720 true Chr09: 3235472-3243191 Glycine max
Glyma.09G038600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 3235472-3236471 Glycine max
Glyma.09G038600 1.0kb downstream 1.0kb downstream 7720 true Chr09: 3236472-3244191 Glycine max
Glyma.09G038600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 3243192-3244191 Glycine max
Glyma.09G038600 2.0kb upstream 2.0kb upstream 8720 true Chr09: 3234472-3243191 Glycine max
Glyma.09G038600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 3234472-3236471 Glycine max
Glyma.09G038600 2.0kb downstream 2.0kb downstream 8720 true Chr09: 3236472-3245191 Glycine max
Glyma.09G038600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 3243192-3245191 Glycine max
Glyma.09G038600 5.0kb upstream 5.0kb upstream 11720 true Chr09: 3231472-3243191 Glycine max
Glyma.09G038600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 3231472-3236471 Glycine max
Glyma.09G038600 5.0kb downstream 5.0kb downstream 11720 true Chr09: 3236472-3248191 Glycine max
Glyma.09G038600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 3243192-3248191 Glycine max
Glyma.09G038600 10.0kb upstream 10.0kb upstream 16720 true Chr09: 3226472-3243191 Glycine max
Glyma.09G038600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 3226472-3236471 Glycine max
Glyma.09G038600 10.0kb downstream 10.0kb downstream 16720 true Chr09: 3236472-3253191 Glycine max
Glyma.09G038600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 3243192-3253191 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303705 5265 Fabidae View MSA
124066127 5270 Rosid View MSA
123744774 5271 Pentapetalae View MSA
122789153 5272 Eudicot View MSA
122047485 5273 Angiosperm View MSA
121349595 5274 Embryophyte View MSA
123381370 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.0403 0.0 47.7264    
cufflinks 8.25791 0.0 28.2893    
cufflinks 419.415 0.0 6469.35 High High
cufflinks 2.12595 0.0 8.74137   Low
cufflinks 23.8764 0.0 87.7712 High  
cufflinks 32.9388 0.0 130.083 High  
cufflinks 2.55187 0.0 9.28084   Low
cufflinks 12.2179 0.0 42.3337    
cufflinks 24.7973 0.0 91.4817 High  
cufflinks 4.913        
cufflinks 15.615     High High
cufflinks 48.988     High High
cufflinks 6.581        
cufflinks 8.225     High  
cufflinks 6.427     High  
cufflinks 3.562        
cufflinks 0.636       Low
cufflinks 1.744        
cufflinks 3.442        
cufflinks 6.142        
cufflinks 4.325        
cufflinks 1.709        
cufflinks 0.562       Low
cufflinks 20.415     High High
cufflinks 6.146        
cufflinks 2.469        

0 Strain