Gene : Glyma.09G038700 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR34804:SF1 - CAMP-REGULATED PHOSPHOPROTEIN 19-RELATED PROTEIN Genomic Order:  387
Name:  ? Glyma.09G038700 Secondary Identifier:  ? PAC:30486579
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G038700 0.5kb upstream 0.5kb upstream 3411 true Chr09: 3244546-3247956 Glycine max
Glyma.09G038700 0.5kb upstream 0.5kb upstream 500 false Chr09: 3244546-3245045 Glycine max
Glyma.09G038700 0.5kb downstream 0.5kb downstream 3411 true Chr09: 3245046-3248456 Glycine max
Glyma.09G038700 0.5kb downstream 0.5kb downstream 500 false Chr09: 3247957-3248456 Glycine max
Glyma.09G038700 1.0kb upstream 1.0kb upstream 3911 true Chr09: 3244046-3247956 Glycine max
Glyma.09G038700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 3244046-3245045 Glycine max
Glyma.09G038700 1.0kb downstream 1.0kb downstream 3911 true Chr09: 3245046-3248956 Glycine max
Glyma.09G038700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 3247957-3248956 Glycine max
Glyma.09G038700 2.0kb upstream 2.0kb upstream 4911 true Chr09: 3243046-3247956 Glycine max
Glyma.09G038700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 3243046-3245045 Glycine max
Glyma.09G038700 2.0kb downstream 2.0kb downstream 4911 true Chr09: 3245046-3249956 Glycine max
Glyma.09G038700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 3247957-3249956 Glycine max
Glyma.09G038700 5.0kb upstream 5.0kb upstream 7911 true Chr09: 3240046-3247956 Glycine max
Glyma.09G038700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 3240046-3245045 Glycine max
Glyma.09G038700 5.0kb downstream 5.0kb downstream 7911 true Chr09: 3245046-3252956 Glycine max
Glyma.09G038700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 3247957-3252956 Glycine max
Glyma.09G038700 10.0kb upstream 10.0kb upstream 12911 true Chr09: 3235046-3247956 Glycine max
Glyma.09G038700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 3235046-3245045 Glycine max
Glyma.09G038700 10.0kb downstream 10.0kb downstream 12911 true Chr09: 3245046-3257956 Glycine max
Glyma.09G038700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 3247957-3257956 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309377 5265 Fabidae View MSA
124060714 5270 Rosid View MSA
123751863 5271 Pentapetalae View MSA
122795534 5272 Eudicot View MSA
122049518 5273 Angiosperm View MSA
121345804 5274 Embryophyte View MSA
123427885 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.20909 0.0 8.17114    
cufflinks 1.30614 0.0 4.94595    
cufflinks 8.34951 0.0 27.4826   High
cufflinks 1.46467 0.0 5.50853    
cufflinks 0.482934 0.0 1.90267   Low
cufflinks 1.84606 0.0 6.88843    
cufflinks 0.367421 0.0 1.46248   Low
cufflinks 0.750197 0.0 2.90261    
cufflinks 1.3358 0.0 5.04322    
cufflinks 3.159        
cufflinks 1.293        
cufflinks 4.163        
cufflinks 1.376        
cufflinks 0.052     Low Low
cufflinks 2.611        
cufflinks 1.835        
cufflinks 1.592        
cufflinks 5.273       High
cufflinks 3.08        
cufflinks 2.067        
cufflinks 1.236        
cufflinks 2.171        
cufflinks 3.771        
cufflinks 1.238        
cufflinks 2.027        
cufflinks 0.878        

0 Strain