Gene : Glyma.09G039500 G. max Wm82.a2.v1
Defline:  (1 of 30) PF06749 - Protein of unknown function (DUF1218) (DUF1218) Genomic Order:  395
Name:  ? Glyma.09G039500 Secondary Identifier:  ? PAC:30483468
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G039500 0.5kb upstream 0.5kb upstream 2837 true Chr09: 3304452-3307288 Glycine max
Glyma.09G039500 0.5kb upstream 0.5kb upstream 500 false Chr09: 3304452-3304951 Glycine max
Glyma.09G039500 0.5kb downstream 0.5kb downstream 2837 true Chr09: 3304952-3307788 Glycine max
Glyma.09G039500 0.5kb downstream 0.5kb downstream 500 false Chr09: 3307289-3307788 Glycine max
Glyma.09G039500 1.0kb upstream 1.0kb upstream 3337 true Chr09: 3303952-3307288 Glycine max
Glyma.09G039500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 3303952-3304951 Glycine max
Glyma.09G039500 1.0kb downstream 1.0kb downstream 3337 true Chr09: 3304952-3308288 Glycine max
Glyma.09G039500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 3307289-3308288 Glycine max
Glyma.09G039500 2.0kb upstream 2.0kb upstream 4337 true Chr09: 3302952-3307288 Glycine max
Glyma.09G039500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 3302952-3304951 Glycine max
Glyma.09G039500 2.0kb downstream 2.0kb downstream 4337 true Chr09: 3304952-3309288 Glycine max
Glyma.09G039500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 3307289-3309288 Glycine max
Glyma.09G039500 5.0kb upstream 5.0kb upstream 7337 true Chr09: 3299952-3307288 Glycine max
Glyma.09G039500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 3299952-3304951 Glycine max
Glyma.09G039500 5.0kb downstream 5.0kb downstream 7337 true Chr09: 3304952-3312288 Glycine max
Glyma.09G039500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 3307289-3312288 Glycine max
Glyma.09G039500 10.0kb upstream 10.0kb upstream 12337 true Chr09: 3294952-3307288 Glycine max
Glyma.09G039500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 3294952-3304951 Glycine max
Glyma.09G039500 10.0kb downstream 10.0kb downstream 12337 true Chr09: 3304952-3317288 Glycine max
Glyma.09G039500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 3307289-3317288 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310206 5265 Fabidae View MSA
124061571 5270 Rosid View MSA
123740931 5271 Pentapetalae View MSA
122790462 5272 Eudicot View MSA
122044950 5273 Angiosperm View MSA
121310368 5274 Embryophyte View MSA
123347870 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.20949 0.0 20.8683   High
cufflinks 0.306149 0.0 1.17607   Low
cufflinks 1.8616 0.0 6.41535    
cufflinks 0.946102 0.0 3.43773    
cufflinks 1.00944 0.0 3.65689    
cufflinks 0.779142 0.0 2.86504    
cufflinks 0.656743 0.0 2.43675    
cufflinks 1.50909 0.0 5.29702    
cufflinks 3.72801 0.0 11.7795   High
cufflinks 1.418       High
cufflinks 0.288        
cufflinks 0.468        
cufflinks 1.1        
cufflinks 0.265        
cufflinks 0.056       Low
cufflinks 0.678        
cufflinks 0.529        
cufflinks 0.755        
cufflinks 0.222       Low
cufflinks 0.625        
cufflinks 0.493        
cufflinks 1.001        
cufflinks 1.776       High
cufflinks 0.327        
cufflinks 0.761        
cufflinks 0.518        

0 Strain