Gene : Glyma.09G039600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR23316:SF22 - ARMADILLO/BETA-CATENIN-LIKE REPEATS-CONTAINING PROTEIN-RELATED Genomic Order:  396
Name:  ? Glyma.09G039600 Secondary Identifier:  ? PAC:30486882
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G039600 0.5kb upstream 0.5kb upstream 4721 true Chr09: 3310809-3315529 Glycine max
Glyma.09G039600 0.5kb upstream 0.5kb upstream 500 false Chr09: 3310809-3311308 Glycine max
Glyma.09G039600 0.5kb downstream 0.5kb downstream 4721 true Chr09: 3311309-3316029 Glycine max
Glyma.09G039600 0.5kb downstream 0.5kb downstream 500 false Chr09: 3315530-3316029 Glycine max
Glyma.09G039600 1.0kb upstream 1.0kb upstream 5221 true Chr09: 3310309-3315529 Glycine max
Glyma.09G039600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 3310309-3311308 Glycine max
Glyma.09G039600 1.0kb downstream 1.0kb downstream 5221 true Chr09: 3311309-3316529 Glycine max
Glyma.09G039600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 3315530-3316529 Glycine max
Glyma.09G039600 2.0kb upstream 2.0kb upstream 6221 true Chr09: 3309309-3315529 Glycine max
Glyma.09G039600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 3309309-3311308 Glycine max
Glyma.09G039600 2.0kb downstream 2.0kb downstream 6221 true Chr09: 3311309-3317529 Glycine max
Glyma.09G039600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 3315530-3317529 Glycine max
Glyma.09G039600 5.0kb upstream 5.0kb upstream 9221 true Chr09: 3306309-3315529 Glycine max
Glyma.09G039600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 3306309-3311308 Glycine max
Glyma.09G039600 5.0kb downstream 5.0kb downstream 9221 true Chr09: 3311309-3320529 Glycine max
Glyma.09G039600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 3315530-3320529 Glycine max
Glyma.09G039600 10.0kb upstream 10.0kb upstream 14221 true Chr09: 3301309-3315529 Glycine max
Glyma.09G039600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 3301309-3311308 Glycine max
Glyma.09G039600 10.0kb downstream 10.0kb downstream 14221 true Chr09: 3311309-3325529 Glycine max
Glyma.09G039600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 3315530-3325529 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041121 5273 Angiosperm View MSA
122309927 5265 Fabidae View MSA
124069677 5270 Rosid View MSA
123750756 5271 Pentapetalae View MSA
122792283 5272 Eudicot View MSA
121348544 5274 Embryophyte View MSA
123424377 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.5488 0.0 55.214   Low
cufflinks 21.4584 0.0 57.7148 High Low
cufflinks 46.7986 0.0 134.441 High High
cufflinks 30.4822 0.0 83.8554 High  
cufflinks 30.6815 0.0 84.6708 High  
cufflinks 47.726 0.0 138.005 High High
cufflinks 23.8032 0.0 64.4257 High  
cufflinks 32.7818 0.0 90.8629 High  
cufflinks 29.1778 0.0 80.0576 High  
cufflinks 22.085     High High
cufflinks 13.045     High  
cufflinks 19.266     High High
cufflinks 22.243     High High
cufflinks 19.257     High High
cufflinks 7.78     High Low
cufflinks 8.989     High  
cufflinks 18.463     High  
cufflinks 12.767     High  
cufflinks 14.3     High  
cufflinks 7.153     High Low
cufflinks 12.582     High  
cufflinks 8.411     High Low
cufflinks 9.906     High  
cufflinks 15.319     High  
cufflinks 8.161     High Low
cufflinks 12.206     High  

0 Strain