Gene : Glyma.09G025100 G. max Wm82.a2.v1
Defline:  (1 of 6) PF03807//PF14833 - NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) // NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase (NAD_binding_11) Genomic Order:  251
Name:  ? Glyma.09G025100 Secondary Identifier:  ? PAC:30486925
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax VALDEG-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G025100 0.5kb upstream 0.5kb upstream 7007 true Chr09: 2023220-2030226 Glycine max
Glyma.09G025100 0.5kb upstream 0.5kb upstream 500 false Chr09: 2029727-2030226 Glycine max
Glyma.09G025100 0.5kb downstream 0.5kb downstream 7007 true Chr09: 2022720-2029726 Glycine max
Glyma.09G025100 0.5kb downstream 0.5kb downstream 500 false Chr09: 2022720-2023219 Glycine max
Glyma.09G025100 1.0kb upstream 1.0kb upstream 7507 true Chr09: 2023220-2030726 Glycine max
Glyma.09G025100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 2029727-2030726 Glycine max
Glyma.09G025100 1.0kb downstream 1.0kb downstream 7507 true Chr09: 2022220-2029726 Glycine max
Glyma.09G025100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 2022220-2023219 Glycine max
Glyma.09G025100 2.0kb upstream 2.0kb upstream 8507 true Chr09: 2023220-2031726 Glycine max
Glyma.09G025100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 2029727-2031726 Glycine max
Glyma.09G025100 2.0kb downstream 2.0kb downstream 8507 true Chr09: 2021220-2029726 Glycine max
Glyma.09G025100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 2021220-2023219 Glycine max
Glyma.09G025100 5.0kb upstream 5.0kb upstream 11507 true Chr09: 2023220-2034726 Glycine max
Glyma.09G025100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 2029727-2034726 Glycine max
Glyma.09G025100 5.0kb downstream 5.0kb downstream 11507 true Chr09: 2018220-2029726 Glycine max
Glyma.09G025100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 2018220-2023219 Glycine max
Glyma.09G025100 10.0kb upstream 10.0kb upstream 16507 true Chr09: 2023220-2039726 Glycine max
Glyma.09G025100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 2029727-2039726 Glycine max
Glyma.09G025100 10.0kb downstream 10.0kb downstream 16507 true Chr09: 2013220-2029726 Glycine max
Glyma.09G025100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 2013220-2023219 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300764 5265 Fabidae View MSA
124062564 5270 Rosid View MSA
123738883 5271 Pentapetalae View MSA
122787575 5272 Eudicot View MSA
122045971 5273 Angiosperm View MSA
121347535 5274 Embryophyte View MSA
123424560 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.96413 0.0 28.0628   Low
cufflinks 3.00073 0.0 31.3235    
cufflinks 21.634 0.0 81.8863 High High
cufflinks 4.77886 0.0 36.6309    
cufflinks 4.67876 0.0 37.9914    
cufflinks 4.91415 0.0 30.192    
cufflinks 11.9931 0.0 71.4491   High
cufflinks 1.75755 0.0 21.9006   Low
cufflinks 6.48938 0.0 42.7938    
cufflinks 0.296        
cufflinks 16.466     High High
cufflinks 1.856        
cufflinks 0.56        
cufflinks 1.086        
cufflinks 6.315     High High
cufflinks 0.322        
cufflinks 0.871        
cufflinks 0.86        
cufflinks 0.759        
cufflinks 0.465        
cufflinks 5.481       High
cufflinks 0.264       Low
cufflinks 0.204       Low
cufflinks 9.206     High High
cufflinks 0.359        
cufflinks 2.228        

0 Strain