Gene : Glyma.09G025600 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR21256 - HISTIDINOL DEHYDROGENASE HDH Genomic Order:  256
Name:  ? Glyma.09G025600 Secondary Identifier:  ? PAC:30484470
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax HISTSYN-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G025600 0.5kb upstream 0.5kb upstream 5524 true Chr09: 2082640-2088163 Glycine max
Glyma.09G025600 0.5kb upstream 0.5kb upstream 500 false Chr09: 2082640-2083139 Glycine max
Glyma.09G025600 0.5kb downstream 0.5kb downstream 5524 true Chr09: 2083140-2088663 Glycine max
Glyma.09G025600 0.5kb downstream 0.5kb downstream 500 false Chr09: 2088164-2088663 Glycine max
Glyma.09G025600 1.0kb upstream 1.0kb upstream 6024 true Chr09: 2082140-2088163 Glycine max
Glyma.09G025600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 2082140-2083139 Glycine max
Glyma.09G025600 1.0kb downstream 1.0kb downstream 6024 true Chr09: 2083140-2089163 Glycine max
Glyma.09G025600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 2088164-2089163 Glycine max
Glyma.09G025600 2.0kb upstream 2.0kb upstream 7024 true Chr09: 2081140-2088163 Glycine max
Glyma.09G025600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 2081140-2083139 Glycine max
Glyma.09G025600 2.0kb downstream 2.0kb downstream 7024 true Chr09: 2083140-2090163 Glycine max
Glyma.09G025600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 2088164-2090163 Glycine max
Glyma.09G025600 5.0kb upstream 5.0kb upstream 10024 true Chr09: 2078140-2088163 Glycine max
Glyma.09G025600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 2078140-2083139 Glycine max
Glyma.09G025600 5.0kb downstream 5.0kb downstream 10024 true Chr09: 2083140-2093163 Glycine max
Glyma.09G025600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 2088164-2093163 Glycine max
Glyma.09G025600 10.0kb upstream 10.0kb upstream 15024 true Chr09: 2073140-2088163 Glycine max
Glyma.09G025600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 2073140-2083139 Glycine max
Glyma.09G025600 10.0kb downstream 10.0kb downstream 15024 true Chr09: 2083140-2098163 Glycine max
Glyma.09G025600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 2088164-2098163 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312335 5265 Fabidae View MSA
124061664 5270 Rosid View MSA
123738837 5271 Pentapetalae View MSA
122785994 5272 Eudicot View MSA
122046994 5273 Angiosperm View MSA
121351553 5274 Embryophyte View MSA
123424167 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.54485 0.0 24.8397   High
cufflinks 4.77471 0.0 16.573    
cufflinks 5.11712 0.0 18.1133    
cufflinks 4.61086 0.0 16.953    
cufflinks 4.72349 0.0 16.1909    
cufflinks 2.93229 0.0 11.5767   Low
cufflinks 4.50914 0.0 15.9349    
cufflinks 4.03067 0.0 14.4147    
cufflinks 3.92918 0.0 14.1655    
cufflinks 0.609        
cufflinks 0.151       Low
cufflinks 1.405        
cufflinks 0.898        
cufflinks 1.101        
cufflinks 0.395        
cufflinks 0.904        
cufflinks 0.451        
cufflinks 1.602       High
cufflinks 1.49        
cufflinks 1.236        
cufflinks 0.226       Low
cufflinks 1.4        
cufflinks 1.374        
cufflinks 0.188       Low
cufflinks 1.167        
cufflinks 0.383        

0 Strain