Gene : Glyma.09G028800 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR12873//PTHR12873:SF2 - T7-LIKE MITOCHONDRIAL DNA HELICASE Genomic Order:  288
Name:  ? Glyma.09G028800 Secondary Identifier:  ? PAC:30484535
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G028800 0.5kb upstream 0.5kb upstream 8202 true Chr09: 2360628-2368829 Glycine max
Glyma.09G028800 0.5kb upstream 0.5kb upstream 500 false Chr09: 2368330-2368829 Glycine max
Glyma.09G028800 0.5kb downstream 0.5kb downstream 8202 true Chr09: 2360128-2368329 Glycine max
Glyma.09G028800 0.5kb downstream 0.5kb downstream 500 false Chr09: 2360128-2360627 Glycine max
Glyma.09G028800 1.0kb upstream 1.0kb upstream 8702 true Chr09: 2360628-2369329 Glycine max
Glyma.09G028800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 2368330-2369329 Glycine max
Glyma.09G028800 1.0kb downstream 1.0kb downstream 8702 true Chr09: 2359628-2368329 Glycine max
Glyma.09G028800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 2359628-2360627 Glycine max
Glyma.09G028800 2.0kb upstream 2.0kb upstream 9702 true Chr09: 2360628-2370329 Glycine max
Glyma.09G028800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 2368330-2370329 Glycine max
Glyma.09G028800 2.0kb downstream 2.0kb downstream 9702 true Chr09: 2358628-2368329 Glycine max
Glyma.09G028800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 2358628-2360627 Glycine max
Glyma.09G028800 5.0kb upstream 5.0kb upstream 12702 true Chr09: 2360628-2373329 Glycine max
Glyma.09G028800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 2368330-2373329 Glycine max
Glyma.09G028800 5.0kb downstream 5.0kb downstream 12702 true Chr09: 2355628-2368329 Glycine max
Glyma.09G028800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 2355628-2360627 Glycine max
Glyma.09G028800 10.0kb upstream 10.0kb upstream 17702 true Chr09: 2360628-2378329 Glycine max
Glyma.09G028800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 2368330-2378329 Glycine max
Glyma.09G028800 10.0kb downstream 10.0kb downstream 17702 true Chr09: 2350628-2368329 Glycine max
Glyma.09G028800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 2350628-2360627 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779308 5273 Angiosperm View MSA
122306397 5265 Fabidae View MSA
124073387 5270 Rosid View MSA
123742037 5271 Pentapetalae View MSA
122770181 5272 Eudicot View MSA
121050980 5274 Embryophyte View MSA
123091087 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.743 0.0 47.3656   High
cufflinks 8.63078 0.0 23.8382    
cufflinks 14.0136 0.0 37.5794    
cufflinks 9.94612 0.0 27.1441    
cufflinks 2.787 0.0 8.88002   Low
cufflinks 1.57963 0.0 5.40527   Low
cufflinks 6.63765 0.0 18.8121    
cufflinks 7.97596 0.0 22.1694    
cufflinks 7.31975 0.0 20.5132    
cufflinks 0.817        
cufflinks 0.297       Low
cufflinks 2.689        
cufflinks 0.288       Low
cufflinks 0.354        
cufflinks 0.859        
cufflinks 2.387        
cufflinks 0.339        
cufflinks 2.236        
cufflinks 1.43        
cufflinks 4.428       High
cufflinks 0.22       Low
cufflinks 3.565       High
cufflinks 2.588        
cufflinks 0.281       Low
cufflinks 3.491       High
cufflinks 0.289       Low

0 Strain