Gene : Glyma.09G030400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10805 - COATOMER SUBUNIT EPSILON Genomic Order:  304
Name:  ? Glyma.09G030400 Secondary Identifier:  ? PAC:30482620
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G030400 0.5kb upstream 0.5kb upstream 3759 true Chr09: 2511815-2515573 Glycine max
Glyma.09G030400 0.5kb upstream 0.5kb upstream 500 false Chr09: 2515074-2515573 Glycine max
Glyma.09G030400 0.5kb downstream 0.5kb downstream 3759 true Chr09: 2511315-2515073 Glycine max
Glyma.09G030400 0.5kb downstream 0.5kb downstream 500 false Chr09: 2511315-2511814 Glycine max
Glyma.09G030400 1.0kb upstream 1.0kb upstream 4259 true Chr09: 2511815-2516073 Glycine max
Glyma.09G030400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 2515074-2516073 Glycine max
Glyma.09G030400 1.0kb downstream 1.0kb downstream 4259 true Chr09: 2510815-2515073 Glycine max
Glyma.09G030400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 2510815-2511814 Glycine max
Glyma.09G030400 2.0kb upstream 2.0kb upstream 5259 true Chr09: 2511815-2517073 Glycine max
Glyma.09G030400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 2515074-2517073 Glycine max
Glyma.09G030400 2.0kb downstream 2.0kb downstream 5259 true Chr09: 2509815-2515073 Glycine max
Glyma.09G030400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 2509815-2511814 Glycine max
Glyma.09G030400 5.0kb upstream 5.0kb upstream 8259 true Chr09: 2511815-2520073 Glycine max
Glyma.09G030400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 2515074-2520073 Glycine max
Glyma.09G030400 5.0kb downstream 5.0kb downstream 8259 true Chr09: 2506815-2515073 Glycine max
Glyma.09G030400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 2506815-2511814 Glycine max
Glyma.09G030400 10.0kb upstream 10.0kb upstream 13259 true Chr09: 2511815-2525073 Glycine max
Glyma.09G030400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 2515074-2525073 Glycine max
Glyma.09G030400 10.0kb downstream 10.0kb downstream 13259 true Chr09: 2501815-2515073 Glycine max
Glyma.09G030400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 2501815-2511814 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300769 5265 Fabidae View MSA
124061720 5270 Rosid View MSA
123739353 5271 Pentapetalae View MSA
122787483 5272 Eudicot View MSA
122042986 5273 Angiosperm View MSA
121344320 5274 Embryophyte View MSA
123426837 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.6412 0.0 63.0916 High Low
cufflinks 36.1675 0.0 97.0373 High  
cufflinks 24.1842 0.0 64.5551 High Low
cufflinks 51.5616 0.0 141.05 High  
cufflinks 58.1505 0.0 161.26 High  
cufflinks 49.3334 0.0 134.66 High  
cufflinks 47.0291 0.0 127.994 High  
cufflinks 66.9411 0.0 187.954 High High
cufflinks 34.0431 0.0 91.2275 High  
cufflinks 25.559     High High
cufflinks 7.925     High  
cufflinks 8.192     High  
cufflinks 23.045     High High
cufflinks 29.92     High High
cufflinks 6.292     High Low
cufflinks 11.184     High  
cufflinks 8.149     High  
cufflinks 12.183     High  
cufflinks 16.567     High  
cufflinks 8.452     High  
cufflinks 9.874     High  
cufflinks 9.453     High  
cufflinks 11.299     High  
cufflinks 8.188     High  
cufflinks 8.276     High  
cufflinks 10.283     High  

0 Strain