Gene : Glyma.09G031600 G. max Wm82.a2.v1
Defline:  (1 of 7) PF13229 - Right handed beta helix region (Beta_helix) Genomic Order:  316
Name:  ? Glyma.09G031600 Secondary Identifier:  ? PAC:30483642
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1081 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G031600 0.5kb upstream 0.5kb upstream 3842 true Chr09: 2592440-2596281 Glycine max
Glyma.09G031600 0.5kb upstream 0.5kb upstream 500 false Chr09: 2595782-2596281 Glycine max
Glyma.09G031600 0.5kb downstream 0.5kb downstream 3842 true Chr09: 2591940-2595781 Glycine max
Glyma.09G031600 0.5kb downstream 0.5kb downstream 500 false Chr09: 2591940-2592439 Glycine max
Glyma.09G031600 1.0kb upstream 1.0kb upstream 4342 true Chr09: 2592440-2596781 Glycine max
Glyma.09G031600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 2595782-2596781 Glycine max
Glyma.09G031600 1.0kb downstream 1.0kb downstream 4342 true Chr09: 2591440-2595781 Glycine max
Glyma.09G031600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 2591440-2592439 Glycine max
Glyma.09G031600 2.0kb upstream 2.0kb upstream 5342 true Chr09: 2592440-2597781 Glycine max
Glyma.09G031600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 2595782-2597781 Glycine max
Glyma.09G031600 2.0kb downstream 2.0kb downstream 5342 true Chr09: 2590440-2595781 Glycine max
Glyma.09G031600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 2590440-2592439 Glycine max
Glyma.09G031600 5.0kb upstream 5.0kb upstream 8342 true Chr09: 2592440-2600781 Glycine max
Glyma.09G031600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 2595782-2600781 Glycine max
Glyma.09G031600 5.0kb downstream 5.0kb downstream 8342 true Chr09: 2587440-2595781 Glycine max
Glyma.09G031600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 2587440-2592439 Glycine max
Glyma.09G031600 10.0kb upstream 10.0kb upstream 13342 true Chr09: 2592440-2605781 Glycine max
Glyma.09G031600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 2595782-2605781 Glycine max
Glyma.09G031600 10.0kb downstream 10.0kb downstream 13342 true Chr09: 2582440-2595781 Glycine max
Glyma.09G031600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 2582440-2592439 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312563 5265 Fabidae View MSA
124065487 5270 Rosid View MSA
123736627 5271 Pentapetalae View MSA
122795582 5272 Eudicot View MSA
122048646 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0782667 0.0 0.311536 Low Low
cufflinks 0.174766 0.0 0.674899 Low  
cufflinks 0.183109 0.0 0.704087 Low  
cufflinks 3.68909 0.0 10.9778   High
cufflinks 2.88333 0.0 8.90473    
cufflinks 0.751767 0.0 2.69653    
cufflinks 0.164606 0.0 0.637577 Low  
cufflinks 0.326237 0.0 1.22414    
cufflinks 10.0599 0.0 27.1572   High
cufflinks 0.264        
cufflinks 0.018     Low Low
cufflinks 0.737        
cufflinks 2.655        
cufflinks 2.81        
cufflinks 7.301     High High
cufflinks 3.378        
cufflinks 0.055     Low  
cufflinks 0.565        
cufflinks 1.24        
cufflinks 0.965        
cufflinks 0.021     Low Low
cufflinks 2.201        
cufflinks 3.801        
cufflinks 0.006     Low Low
cufflinks 2.997        
cufflinks 0.067        

0 Strain