Gene : Glyma.09G079600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31342:SF12 - F11A17.16 Genomic Order:  796
Name:  ? Glyma.09G079600 Secondary Identifier:  ? PAC:30485119
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G079600 0.5kb upstream 0.5kb upstream 9623 true Chr09: 9098853-9108475 Glycine max
Glyma.09G079600 0.5kb upstream 0.5kb upstream 500 false Chr09: 9098853-9099352 Glycine max
Glyma.09G079600 0.5kb downstream 0.5kb downstream 9623 true Chr09: 9099353-9108975 Glycine max
Glyma.09G079600 0.5kb downstream 0.5kb downstream 500 false Chr09: 9108476-9108975 Glycine max
Glyma.09G079600 1.0kb upstream 1.0kb upstream 10123 true Chr09: 9098353-9108475 Glycine max
Glyma.09G079600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 9098353-9099352 Glycine max
Glyma.09G079600 1.0kb downstream 1.0kb downstream 10123 true Chr09: 9099353-9109475 Glycine max
Glyma.09G079600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 9108476-9109475 Glycine max
Glyma.09G079600 2.0kb upstream 2.0kb upstream 11123 true Chr09: 9097353-9108475 Glycine max
Glyma.09G079600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 9097353-9099352 Glycine max
Glyma.09G079600 2.0kb downstream 2.0kb downstream 11123 true Chr09: 9099353-9110475 Glycine max
Glyma.09G079600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 9108476-9110475 Glycine max
Glyma.09G079600 5.0kb upstream 5.0kb upstream 14123 true Chr09: 9094353-9108475 Glycine max
Glyma.09G079600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 9094353-9099352 Glycine max
Glyma.09G079600 5.0kb downstream 5.0kb downstream 14123 true Chr09: 9099353-9113475 Glycine max
Glyma.09G079600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 9108476-9113475 Glycine max
Glyma.09G079600 10.0kb upstream 10.0kb upstream 19123 true Chr09: 9089353-9108475 Glycine max
Glyma.09G079600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 9089353-9099352 Glycine max
Glyma.09G079600 10.0kb downstream 10.0kb downstream 19123 true Chr09: 9099353-9118475 Glycine max
Glyma.09G079600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 9108476-9118475 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310858 5265 Fabidae View MSA
124068159 5270 Rosid View MSA
123646677 5271 Pentapetalae View MSA
122790605 5272 Eudicot View MSA
122043379 5273 Angiosperm View MSA
121310114 5274 Embryophyte View MSA
123427495 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.35088 0.0 7.46476    
cufflinks 1.18743 0.0 6.59516    
cufflinks 0.435901 0.0 3.09167    
cufflinks 2.89449 0.0 12.0846    
cufflinks 1.37516 0.0 7.37429    
cufflinks 0.136827 0.0 0.692573 Low Low
cufflinks 2.19298 0.0 9.97108    
cufflinks 6.90763 0.0 24.1848   High
cufflinks 3.85266 0.0 12.6904    
cufflinks 0.457        
cufflinks 0.093       Low
cufflinks 0.183        
cufflinks 0.269        
cufflinks 0.059     Low Low
cufflinks 0.11        
cufflinks 0.319        
cufflinks 0.353        
cufflinks 0.458        
cufflinks 0.21        
cufflinks 0.575       High
cufflinks 0.11        
cufflinks 0.543       High
cufflinks 0.314        
cufflinks 0.071       Low
cufflinks 0.467       High
cufflinks 0.138        

0 Strain