Gene : Glyma.09G079900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13683:SF296 - ASPARTYL PROTEASE FAMILY PROTEIN Genomic Order:  799
Name:  ? Glyma.09G079900 Secondary Identifier:  ? PAC:30484088
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G079900 0.5kb upstream 0.5kb upstream 4922 true Chr09: 9159210-9164131 Glycine max
Glyma.09G079900 0.5kb upstream 0.5kb upstream 500 false Chr09: 9159210-9159709 Glycine max
Glyma.09G079900 0.5kb downstream 0.5kb downstream 4922 true Chr09: 9159710-9164631 Glycine max
Glyma.09G079900 0.5kb downstream 0.5kb downstream 500 false Chr09: 9164132-9164631 Glycine max
Glyma.09G079900 1.0kb upstream 1.0kb upstream 5422 true Chr09: 9158710-9164131 Glycine max
Glyma.09G079900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 9158710-9159709 Glycine max
Glyma.09G079900 1.0kb downstream 1.0kb downstream 5422 true Chr09: 9159710-9165131 Glycine max
Glyma.09G079900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 9164132-9165131 Glycine max
Glyma.09G079900 2.0kb upstream 2.0kb upstream 6422 true Chr09: 9157710-9164131 Glycine max
Glyma.09G079900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 9157710-9159709 Glycine max
Glyma.09G079900 2.0kb downstream 2.0kb downstream 6422 true Chr09: 9159710-9166131 Glycine max
Glyma.09G079900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 9164132-9166131 Glycine max
Glyma.09G079900 5.0kb upstream 5.0kb upstream 9422 true Chr09: 9154710-9164131 Glycine max
Glyma.09G079900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 9154710-9159709 Glycine max
Glyma.09G079900 5.0kb downstream 5.0kb downstream 9422 true Chr09: 9159710-9169131 Glycine max
Glyma.09G079900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 9164132-9169131 Glycine max
Glyma.09G079900 10.0kb upstream 10.0kb upstream 14422 true Chr09: 9149710-9164131 Glycine max
Glyma.09G079900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 9149710-9159709 Glycine max
Glyma.09G079900 10.0kb downstream 10.0kb downstream 14422 true Chr09: 9159710-9174131 Glycine max
Glyma.09G079900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 9164132-9174131 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780043 5273 Angiosperm View MSA
122311661 5265 Fabidae View MSA
124071121 5270 Rosid View MSA
123744877 5271 Pentapetalae View MSA
122771281 5272 Eudicot View MSA
121051677 5274 Embryophyte View MSA
123428778 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.61634 0.0 21.0965    
cufflinks 7.32822 0.0 22.9628    
cufflinks 12.5401 0.0 38.1771    
cufflinks 12.354 0.0 38.3095    
cufflinks 6.47041 0.0 20.7936    
cufflinks 16.3931 0.0 55.5408   High
cufflinks 16.818 0.0 52.2744   High
cufflinks 9.36572 0.0 29.7843    
cufflinks 4.93151 0.0 16.7726   Low
cufflinks 4.528       High
cufflinks 1.22       Low
cufflinks 2.384        
cufflinks 1.978        
cufflinks 1.756        
cufflinks 1.038       Low
cufflinks 3.329        
cufflinks 1.565        
cufflinks 2.958        
cufflinks 6.78       High
cufflinks 4.04        
cufflinks 1.039       Low
cufflinks 3.523        
cufflinks 5.838       High
cufflinks 1.036       Low
cufflinks 4.089        
cufflinks 1.112       Low

0 Strain