Gene : Glyma.09G070700 G. max Wm82.a2.v1
Defline:  (1 of 2) 5.3.1.23 - S-methyl-5-thioribose-1-phosphate isomerase / S-methyl-5-thio-D-ribose-1-phosphate aldose-ketose-isomerase Genomic Order:  707
Name:  ? Glyma.09G070700 Secondary Identifier:  ? PAC:30484956
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-4361 Glycine max pathologic  
Gmax PWY-7270 Glycine max pathologic  
Gmax PWY-7528 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G070700 0.5kb upstream 0.5kb upstream 4552 true Chr09: 7215258-7219809 Glycine max
Glyma.09G070700 0.5kb upstream 0.5kb upstream 500 false Chr09: 7219310-7219809 Glycine max
Glyma.09G070700 0.5kb downstream 0.5kb downstream 4552 true Chr09: 7214758-7219309 Glycine max
Glyma.09G070700 0.5kb downstream 0.5kb downstream 500 false Chr09: 7214758-7215257 Glycine max
Glyma.09G070700 1.0kb upstream 1.0kb upstream 5052 true Chr09: 7215258-7220309 Glycine max
Glyma.09G070700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 7219310-7220309 Glycine max
Glyma.09G070700 1.0kb downstream 1.0kb downstream 5052 true Chr09: 7214258-7219309 Glycine max
Glyma.09G070700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 7214258-7215257 Glycine max
Glyma.09G070700 2.0kb upstream 2.0kb upstream 6052 true Chr09: 7215258-7221309 Glycine max
Glyma.09G070700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 7219310-7221309 Glycine max
Glyma.09G070700 2.0kb downstream 2.0kb downstream 6052 true Chr09: 7213258-7219309 Glycine max
Glyma.09G070700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 7213258-7215257 Glycine max
Glyma.09G070700 5.0kb upstream 5.0kb upstream 9052 true Chr09: 7215258-7224309 Glycine max
Glyma.09G070700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 7219310-7224309 Glycine max
Glyma.09G070700 5.0kb downstream 5.0kb downstream 9052 true Chr09: 7210258-7219309 Glycine max
Glyma.09G070700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 7210258-7215257 Glycine max
Glyma.09G070700 10.0kb upstream 10.0kb upstream 14052 true Chr09: 7215258-7229309 Glycine max
Glyma.09G070700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 7219310-7229309 Glycine max
Glyma.09G070700 10.0kb downstream 10.0kb downstream 14052 true Chr09: 7205258-7219309 Glycine max
Glyma.09G070700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 7205258-7215257 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303152 5265 Fabidae View MSA
124060423 5270 Rosid View MSA
123740094 5271 Pentapetalae View MSA
122788864 5272 Eudicot View MSA
122043863 5273 Angiosperm View MSA
121310201 5274 Embryophyte View MSA
123428305 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.9935 0.0 71.8023 High  
cufflinks 24.9515 0.0 74.8462 High  
cufflinks 34.5815 0.0 151.852 High High
cufflinks 25.5087 0.0 108.342 High  
cufflinks 18.4449 0.0 82.2257    
cufflinks 16.0413 0.0 48.1577   Low
cufflinks 26.1404 0.0 78.6977 High  
cufflinks 22.9569 0.0 110.451 High  
cufflinks 18.5807 0.0 74.2349    
cufflinks 3.895        
cufflinks 2.007       Low
cufflinks 6.352       High
cufflinks 4.532        
cufflinks 4.347        
cufflinks 0.771       Low
cufflinks 3.272        
cufflinks 4.528        
cufflinks 6.576       High
cufflinks 5.159        
cufflinks 3.293        
cufflinks 2.466        
cufflinks 3.684        
cufflinks 3.747        
cufflinks 2.959        
cufflinks 3.16        
cufflinks 3.798        

0 Strain