Gene : Glyma.09G062200 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR15664 - C20ORF30 PROTEIN Genomic Order:  622
Name:  ? Glyma.09G062200 Secondary Identifier:  ? PAC:30483505
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G062200 0.5kb upstream 0.5kb upstream 1570 true Chr09: 5900780-5902349 Glycine max
Glyma.09G062200 0.5kb upstream 0.5kb upstream 500 false Chr09: 5900780-5901279 Glycine max
Glyma.09G062200 0.5kb downstream 0.5kb downstream 1570 true Chr09: 5901280-5902849 Glycine max
Glyma.09G062200 0.5kb downstream 0.5kb downstream 500 false Chr09: 5902350-5902849 Glycine max
Glyma.09G062200 1.0kb upstream 1.0kb upstream 2070 true Chr09: 5900280-5902349 Glycine max
Glyma.09G062200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 5900280-5901279 Glycine max
Glyma.09G062200 1.0kb downstream 1.0kb downstream 2070 true Chr09: 5901280-5903349 Glycine max
Glyma.09G062200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 5902350-5903349 Glycine max
Glyma.09G062200 2.0kb upstream 2.0kb upstream 3070 true Chr09: 5899280-5902349 Glycine max
Glyma.09G062200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 5899280-5901279 Glycine max
Glyma.09G062200 2.0kb downstream 2.0kb downstream 3070 true Chr09: 5901280-5904349 Glycine max
Glyma.09G062200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 5902350-5904349 Glycine max
Glyma.09G062200 5.0kb upstream 5.0kb upstream 6070 true Chr09: 5896280-5902349 Glycine max
Glyma.09G062200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 5896280-5901279 Glycine max
Glyma.09G062200 5.0kb downstream 5.0kb downstream 6070 true Chr09: 5901280-5907349 Glycine max
Glyma.09G062200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 5902350-5907349 Glycine max
Glyma.09G062200 10.0kb upstream 10.0kb upstream 11070 true Chr09: 5891280-5902349 Glycine max
Glyma.09G062200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 5891280-5901279 Glycine max
Glyma.09G062200 10.0kb downstream 10.0kb downstream 11070 true Chr09: 5901280-5912349 Glycine max
Glyma.09G062200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 5902350-5912349 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308723 5265 Fabidae View MSA
124062671 5270 Rosid View MSA
123747758 5271 Pentapetalae View MSA
122788490 5272 Eudicot View MSA
122042918 5273 Angiosperm View MSA
121351470 5274 Embryophyte View MSA
123427818 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.3501 0.0 69.783 High Low
cufflinks 19.2921 0.0 54.5005   Low
cufflinks 50.2429 0.0 134.171 High High
cufflinks 39.1683 0.0 105.156 High  
cufflinks 34.5089 0.0 93.0399 High  
cufflinks 36.9205 0.0 99.3207 High  
cufflinks 55.8333 0.0 148.957 High High
cufflinks 35.307 0.0 95.1747 High  
cufflinks 32.9171 0.0 89.0656 High  
cufflinks 10.458     High  
cufflinks 20.914     High High
cufflinks 15.696     High  
cufflinks 7.679     High  
cufflinks 6.614       Low
cufflinks 25.486     High High
cufflinks 8.389     High  
cufflinks 13.861     High  
cufflinks 8.0     High  
cufflinks 9.187     High  
cufflinks 8.482     High  
cufflinks 18.061     High  
cufflinks 9.258     High  
cufflinks 6.15       Low
cufflinks 24.054     High High
cufflinks 8.382     High  
cufflinks 22.461     High High

0 Strain