Gene : Glyma.09G062300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10168:SF112 - GLUTAREDOXIN-C4 Genomic Order:  623
Name:  ? Glyma.09G062300 Secondary Identifier:  ? PAC:30483941
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax THIOREDOX-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G062300 0.5kb upstream 0.5kb upstream 3162 true Chr09: 5905079-5908240 Glycine max
Glyma.09G062300 0.5kb upstream 0.5kb upstream 500 false Chr09: 5905079-5905578 Glycine max
Glyma.09G062300 0.5kb downstream 0.5kb downstream 3162 true Chr09: 5905579-5908740 Glycine max
Glyma.09G062300 0.5kb downstream 0.5kb downstream 500 false Chr09: 5908241-5908740 Glycine max
Glyma.09G062300 1.0kb upstream 1.0kb upstream 3662 true Chr09: 5904579-5908240 Glycine max
Glyma.09G062300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 5904579-5905578 Glycine max
Glyma.09G062300 1.0kb downstream 1.0kb downstream 3662 true Chr09: 5905579-5909240 Glycine max
Glyma.09G062300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 5908241-5909240 Glycine max
Glyma.09G062300 2.0kb upstream 2.0kb upstream 4662 true Chr09: 5903579-5908240 Glycine max
Glyma.09G062300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 5903579-5905578 Glycine max
Glyma.09G062300 2.0kb downstream 2.0kb downstream 4662 true Chr09: 5905579-5910240 Glycine max
Glyma.09G062300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 5908241-5910240 Glycine max
Glyma.09G062300 5.0kb upstream 5.0kb upstream 7662 true Chr09: 5900579-5908240 Glycine max
Glyma.09G062300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 5900579-5905578 Glycine max
Glyma.09G062300 5.0kb downstream 5.0kb downstream 7662 true Chr09: 5905579-5913240 Glycine max
Glyma.09G062300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 5908241-5913240 Glycine max
Glyma.09G062300 10.0kb upstream 10.0kb upstream 12662 true Chr09: 5895579-5908240 Glycine max
Glyma.09G062300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 5895579-5905578 Glycine max
Glyma.09G062300 10.0kb downstream 10.0kb downstream 12662 true Chr09: 5905579-5918240 Glycine max
Glyma.09G062300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 5908241-5918240 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307786 5265 Fabidae View MSA
124064046 5270 Rosid View MSA
123741506 5271 Pentapetalae View MSA
122793687 5272 Eudicot View MSA
122043796 5273 Angiosperm View MSA
121344746 5274 Embryophyte View MSA
123428660 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.9596 0.0 80.949 High Low
cufflinks 42.2412 0.0 112.815 High  
cufflinks 27.227 0.0 73.83 High Low
cufflinks 44.8093 0.0 119.579 High  
cufflinks 46.9752 0.0 125.337 High  
cufflinks 57.1732 0.0 152.7 High  
cufflinks 79.7358 0.0 215.33 High High
cufflinks 39.6061 0.0 105.851 High  
cufflinks 33.8707 0.0 90.9644 High  
cufflinks 10.033     High High
cufflinks 2.703       Low
cufflinks 6.525        
cufflinks 13.619     High High
cufflinks 15.852     High High
cufflinks 1.917       Low
cufflinks 5.562        
cufflinks 4.237        
cufflinks 9.245     High  
cufflinks 9.337     High  
cufflinks 4.567        
cufflinks 3.949        
cufflinks 5.142        
cufflinks 5.073        
cufflinks 4.0        
cufflinks 4.915        
cufflinks 4.584        

0 Strain