Gene : Glyma.09G064300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22942:SF1 - MITOCHONDRIAL DNA REPAIR PROTEIN RECA HOMOLOG Genomic Order:  643
Name:  ? Glyma.09G064300 Secondary Identifier:  ? PAC:30484793
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G064300 0.5kb upstream 0.5kb upstream 8688 true Chr09: 6234620-6243307 Glycine max
Glyma.09G064300 0.5kb upstream 0.5kb upstream 500 false Chr09: 6242808-6243307 Glycine max
Glyma.09G064300 0.5kb downstream 0.5kb downstream 8688 true Chr09: 6234120-6242807 Glycine max
Glyma.09G064300 0.5kb downstream 0.5kb downstream 500 false Chr09: 6234120-6234619 Glycine max
Glyma.09G064300 1.0kb upstream 1.0kb upstream 9188 true Chr09: 6234620-6243807 Glycine max
Glyma.09G064300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 6242808-6243807 Glycine max
Glyma.09G064300 1.0kb downstream 1.0kb downstream 9188 true Chr09: 6233620-6242807 Glycine max
Glyma.09G064300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 6233620-6234619 Glycine max
Glyma.09G064300 2.0kb upstream 2.0kb upstream 10188 true Chr09: 6234620-6244807 Glycine max
Glyma.09G064300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 6242808-6244807 Glycine max
Glyma.09G064300 2.0kb downstream 2.0kb downstream 10188 true Chr09: 6232620-6242807 Glycine max
Glyma.09G064300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 6232620-6234619 Glycine max
Glyma.09G064300 5.0kb upstream 5.0kb upstream 13188 true Chr09: 6234620-6247807 Glycine max
Glyma.09G064300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 6242808-6247807 Glycine max
Glyma.09G064300 5.0kb downstream 5.0kb downstream 13188 true Chr09: 6229620-6242807 Glycine max
Glyma.09G064300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 6229620-6234619 Glycine max
Glyma.09G064300 10.0kb upstream 10.0kb upstream 18188 true Chr09: 6234620-6252807 Glycine max
Glyma.09G064300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 6242808-6252807 Glycine max
Glyma.09G064300 10.0kb downstream 10.0kb downstream 18188 true Chr09: 6224620-6242807 Glycine max
Glyma.09G064300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 6224620-6234619 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297351 5265 Fabidae View MSA
124060910 5270 Rosid View MSA
123743404 5271 Pentapetalae View MSA
122790818 5272 Eudicot View MSA
122045748 5273 Angiosperm View MSA
121351318 5274 Embryophyte View MSA
123382118 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.9369 0.0 6.27283    
cufflinks 7.60027 0.0 20.8025   High
cufflinks 1.29045 0.0 4.38069   Low
cufflinks 2.58534 0.0 8.01196    
cufflinks 4.90489 0.0 13.9994    
cufflinks 2.71562 0.0 8.37447    
cufflinks 2.37986 0.0 7.48772    
cufflinks 4.45961 0.0 12.8537    
cufflinks 3.51403 0.0 10.4495    
cufflinks 0.742        
cufflinks 0.082       Low
cufflinks 0.769        
cufflinks 1.557       High
cufflinks 2.142       High
cufflinks 0.089       Low
cufflinks 0.667        
cufflinks 0.186        
cufflinks 0.7        
cufflinks 2.032       High
cufflinks 0.409        
cufflinks 0.127       Low
cufflinks 0.613        
cufflinks 1.212        
cufflinks 0.108       Low
cufflinks 0.573        
cufflinks 0.183        

0 Strain