Gene : Glyma.09G064500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12919:SF20 - 28S RIBOSOMAL PROTEIN S16, MITOCHONDRIAL Genomic Order:  645
Name:  ? Glyma.09G064500 Secondary Identifier:  ? PAC:30485689
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G064500 0.5kb upstream 0.5kb upstream 2696 true Chr09: 6260887-6263582 Glycine max
Glyma.09G064500 0.5kb upstream 0.5kb upstream 500 false Chr09: 6260887-6261386 Glycine max
Glyma.09G064500 0.5kb downstream 0.5kb downstream 2696 true Chr09: 6261387-6264082 Glycine max
Glyma.09G064500 0.5kb downstream 0.5kb downstream 500 false Chr09: 6263583-6264082 Glycine max
Glyma.09G064500 1.0kb upstream 1.0kb upstream 3196 true Chr09: 6260387-6263582 Glycine max
Glyma.09G064500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 6260387-6261386 Glycine max
Glyma.09G064500 1.0kb downstream 1.0kb downstream 3196 true Chr09: 6261387-6264582 Glycine max
Glyma.09G064500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 6263583-6264582 Glycine max
Glyma.09G064500 2.0kb upstream 2.0kb upstream 4196 true Chr09: 6259387-6263582 Glycine max
Glyma.09G064500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 6259387-6261386 Glycine max
Glyma.09G064500 2.0kb downstream 2.0kb downstream 4196 true Chr09: 6261387-6265582 Glycine max
Glyma.09G064500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 6263583-6265582 Glycine max
Glyma.09G064500 5.0kb upstream 5.0kb upstream 7196 true Chr09: 6256387-6263582 Glycine max
Glyma.09G064500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 6256387-6261386 Glycine max
Glyma.09G064500 5.0kb downstream 5.0kb downstream 7196 true Chr09: 6261387-6268582 Glycine max
Glyma.09G064500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 6263583-6268582 Glycine max
Glyma.09G064500 10.0kb upstream 10.0kb upstream 12196 true Chr09: 6251387-6263582 Glycine max
Glyma.09G064500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 6251387-6261386 Glycine max
Glyma.09G064500 10.0kb downstream 10.0kb downstream 12196 true Chr09: 6261387-6273582 Glycine max
Glyma.09G064500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 6263583-6273582 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299837 5265 Fabidae View MSA
124065829 5270 Rosid View MSA
123738502 5271 Pentapetalae View MSA
122792819 5272 Eudicot View MSA
122051162 5273 Angiosperm View MSA
121348917 5274 Embryophyte View MSA
123426601 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.92386 0.0 28.9089    
cufflinks 10.808 0.0 31.1754    
cufflinks 4.9647 0.0 15.8831   Low
cufflinks 6.74215 0.0 20.6842   Low
cufflinks 13.2685 0.0 37.2867    
cufflinks 12.9401 0.0 36.4621    
cufflinks 15.2194 0.0 42.2957   High
cufflinks 9.57955 0.0 27.9908    
cufflinks 15.19 0.0 42.1614   High
cufflinks 2.862        
cufflinks 1.523        
cufflinks 2.667        
cufflinks 7.15       High
cufflinks 10.178     High High
cufflinks 1.817        
cufflinks 2.232        
cufflinks 2.45        
cufflinks 3.231        
cufflinks 3.285        
cufflinks 1.285       Low
cufflinks 1.692        
cufflinks 1.663        
cufflinks 2.29        
cufflinks 1.339       Low
cufflinks 1.668        
cufflinks 1.953        

0 Strain