Gene : Glyma.09G056100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR23244//PTHR23244:SF326 - KELCH REPEAT DOMAIN Genomic Order:  561
Name:  ? Glyma.09G056100 Secondary Identifier:  ? PAC:30485641
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G056100 0.5kb upstream 0.5kb upstream 11979 true Chr09: 5011260-5023238 Glycine max
Glyma.09G056100 0.5kb upstream 0.5kb upstream 500 false Chr09: 5022739-5023238 Glycine max
Glyma.09G056100 0.5kb downstream 0.5kb downstream 11979 true Chr09: 5010760-5022738 Glycine max
Glyma.09G056100 0.5kb downstream 0.5kb downstream 500 false Chr09: 5010760-5011259 Glycine max
Glyma.09G056100 1.0kb upstream 1.0kb upstream 12479 true Chr09: 5011260-5023738 Glycine max
Glyma.09G056100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 5022739-5023738 Glycine max
Glyma.09G056100 1.0kb downstream 1.0kb downstream 12479 true Chr09: 5010260-5022738 Glycine max
Glyma.09G056100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 5010260-5011259 Glycine max
Glyma.09G056100 2.0kb upstream 2.0kb upstream 13479 true Chr09: 5011260-5024738 Glycine max
Glyma.09G056100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 5022739-5024738 Glycine max
Glyma.09G056100 2.0kb downstream 2.0kb downstream 13479 true Chr09: 5009260-5022738 Glycine max
Glyma.09G056100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 5009260-5011259 Glycine max
Glyma.09G056100 5.0kb upstream 5.0kb upstream 16479 true Chr09: 5011260-5027738 Glycine max
Glyma.09G056100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 5022739-5027738 Glycine max
Glyma.09G056100 5.0kb downstream 5.0kb downstream 16479 true Chr09: 5006260-5022738 Glycine max
Glyma.09G056100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 5006260-5011259 Glycine max
Glyma.09G056100 10.0kb upstream 10.0kb upstream 21479 true Chr09: 5011260-5032738 Glycine max
Glyma.09G056100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 5022739-5032738 Glycine max
Glyma.09G056100 10.0kb downstream 10.0kb downstream 21479 true Chr09: 5001260-5022738 Glycine max
Glyma.09G056100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 5001260-5011259 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122242915 5265 Fabidae Singleton cluster - no MSA
124068680 5270 Rosid View MSA
123751990 5271 Pentapetalae View MSA
122789390 5272 Eudicot View MSA
122047758 5273 Angiosperm View MSA
121310788 5274 Embryophyte View MSA
123428379 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.8762 0.0 49.6928   High
cufflinks 9.01025 0.0 32.3598    
cufflinks 9.52739 0.0 28.5614    
cufflinks 9.43011 0.0 28.2862    
cufflinks 5.65583 0.0 17.8564   Low
cufflinks 4.66265 0.0 15.3386   Low
cufflinks 9.52078 0.0 28.6052    
cufflinks 7.59425 0.0 27.8378    
cufflinks 6.05403 0.0 18.9794    
cufflinks 0.813        
cufflinks 0.491        
cufflinks 1.079        
cufflinks 0.381       Low
cufflinks 0.307       Low
cufflinks 0.884        
cufflinks 1.783       High
cufflinks 0.421       Low
cufflinks 1.878       High
cufflinks 1.398        
cufflinks 2.003       High
cufflinks 0.616        
cufflinks 2.041       High
cufflinks 1.776        
cufflinks 0.652        
cufflinks 1.859       High
cufflinks 0.457       Low

0 Strain