Gene : Glyma.09G057500 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG0296 - Angio-associated migratory cell protein (contains WD40 repeats) Genomic Order:  575
Name:  ? Glyma.09G057500 Secondary Identifier:  ? PAC:30486274
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G057500 0.5kb upstream 0.5kb upstream 4980 true Chr09: 5213774-5218753 Glycine max
Glyma.09G057500 0.5kb upstream 0.5kb upstream 500 false Chr09: 5218254-5218753 Glycine max
Glyma.09G057500 0.5kb downstream 0.5kb downstream 4980 true Chr09: 5213274-5218253 Glycine max
Glyma.09G057500 0.5kb downstream 0.5kb downstream 500 false Chr09: 5213274-5213773 Glycine max
Glyma.09G057500 1.0kb upstream 1.0kb upstream 5480 true Chr09: 5213774-5219253 Glycine max
Glyma.09G057500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 5218254-5219253 Glycine max
Glyma.09G057500 1.0kb downstream 1.0kb downstream 5480 true Chr09: 5212774-5218253 Glycine max
Glyma.09G057500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 5212774-5213773 Glycine max
Glyma.09G057500 2.0kb upstream 2.0kb upstream 6480 true Chr09: 5213774-5220253 Glycine max
Glyma.09G057500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 5218254-5220253 Glycine max
Glyma.09G057500 2.0kb downstream 2.0kb downstream 6480 true Chr09: 5211774-5218253 Glycine max
Glyma.09G057500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 5211774-5213773 Glycine max
Glyma.09G057500 5.0kb upstream 5.0kb upstream 9480 true Chr09: 5213774-5223253 Glycine max
Glyma.09G057500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 5218254-5223253 Glycine max
Glyma.09G057500 5.0kb downstream 5.0kb downstream 9480 true Chr09: 5208774-5218253 Glycine max
Glyma.09G057500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 5208774-5213773 Glycine max
Glyma.09G057500 10.0kb upstream 10.0kb upstream 14480 true Chr09: 5213774-5228253 Glycine max
Glyma.09G057500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 5218254-5228253 Glycine max
Glyma.09G057500 10.0kb downstream 10.0kb downstream 14480 true Chr09: 5203774-5218253 Glycine max
Glyma.09G057500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 5203774-5213773 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122316605 5265 Fabidae View MSA
124063890 5270 Rosid View MSA
123740891 5271 Pentapetalae View MSA
122786318 5272 Eudicot View MSA
122041635 5273 Angiosperm View MSA
121347173 5274 Embryophyte View MSA
123424398 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.44654 0.0 9.60246    
cufflinks 1.28823 0.0 5.74299    
cufflinks 4.70388 0.0 14.9217   High
cufflinks 1.41298 0.0 6.21866    
cufflinks 1.72781 0.0 7.5257    
cufflinks 0.91611 0.0 4.23608   Low
cufflinks 1.74333 0.0 7.55423    
cufflinks 1.456 0.0 6.27915    
cufflinks 1.76505 0.0 7.6129    
cufflinks 0.352       Low
cufflinks 0.473        
cufflinks 1.66       High
cufflinks 0.465        
cufflinks 0.795        
cufflinks 1.709       High
cufflinks 0.757        
cufflinks 0.23       Low
cufflinks 1.033        
cufflinks 0.989        
cufflinks 0.883        
cufflinks 0.537        
cufflinks 0.911        
cufflinks 0.85        
cufflinks 0.607        
cufflinks 0.787        
cufflinks 0.326       Low

0 Strain