Gene : Glyma.09G058100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11652//PTHR11652:SF17 - 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER Genomic Order:  581
Name:  ? Glyma.09G058100 Secondary Identifier:  ? PAC:30484347
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G058100 0.5kb upstream 0.5kb upstream 3280 true Chr09: 5287288-5290567 Glycine max
Glyma.09G058100 0.5kb upstream 0.5kb upstream 500 false Chr09: 5287288-5287787 Glycine max
Glyma.09G058100 0.5kb downstream 0.5kb downstream 3280 true Chr09: 5287788-5291067 Glycine max
Glyma.09G058100 0.5kb downstream 0.5kb downstream 500 false Chr09: 5290568-5291067 Glycine max
Glyma.09G058100 1.0kb upstream 1.0kb upstream 3780 true Chr09: 5286788-5290567 Glycine max
Glyma.09G058100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 5286788-5287787 Glycine max
Glyma.09G058100 1.0kb downstream 1.0kb downstream 3780 true Chr09: 5287788-5291567 Glycine max
Glyma.09G058100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 5290568-5291567 Glycine max
Glyma.09G058100 2.0kb upstream 2.0kb upstream 4780 true Chr09: 5285788-5290567 Glycine max
Glyma.09G058100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 5285788-5287787 Glycine max
Glyma.09G058100 2.0kb downstream 2.0kb downstream 4780 true Chr09: 5287788-5292567 Glycine max
Glyma.09G058100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 5290568-5292567 Glycine max
Glyma.09G058100 5.0kb upstream 5.0kb upstream 7780 true Chr09: 5282788-5290567 Glycine max
Glyma.09G058100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 5282788-5287787 Glycine max
Glyma.09G058100 5.0kb downstream 5.0kb downstream 7780 true Chr09: 5287788-5295567 Glycine max
Glyma.09G058100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 5290568-5295567 Glycine max
Glyma.09G058100 10.0kb upstream 10.0kb upstream 12780 true Chr09: 5277788-5290567 Glycine max
Glyma.09G058100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 5277788-5287787 Glycine max
Glyma.09G058100 10.0kb downstream 10.0kb downstream 12780 true Chr09: 5287788-5300567 Glycine max
Glyma.09G058100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 5290568-5300567 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121610451 5273 Angiosperm Singleton cluster - no MSA
122243123 5265 Fabidae Singleton cluster - no MSA
123987698 5270 Rosid Singleton cluster - no MSA
123562949 5271 Pentapetalae Singleton cluster - no MSA
122597731 5272 Eudicot Singleton cluster - no MSA
123429171 5275 Viridiplantae View MSA
120882693 5274 Embryophyte Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.35573 0.0 5.10124    
cufflinks 1.23538 0.0 4.6621    
cufflinks 0.287194 0.0 1.14737    
cufflinks 14.2878 0.0 43.0713   High
cufflinks 0.451177 0.0 1.77755    
cufflinks 0.533944 0.0 2.08983    
cufflinks 10.5114 0.0 33.2452   High
cufflinks 0.323196 0.0 1.28684    
cufflinks 0.697828 0.0 2.69916    
cufflinks 0.21        
cufflinks 0.062       Low
cufflinks 0.129        
cufflinks 0.225        
cufflinks 0.267        
cufflinks 0.216        
cufflinks 0.326        
cufflinks 0.108        
cufflinks 0.165        
cufflinks 0.281        
cufflinks 0.267        
cufflinks 0.05     Low Low
cufflinks 0.319        
cufflinks 0.495       High
cufflinks 0.063       Low
cufflinks 0.394       High
cufflinks 0.063     Low Low

0 Strain