Gene : Glyma.09G059200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22957:SF28 - TBC1 DOMAIN FAMILY MEMBER 5 Genomic Order:  592
Name:  ? Glyma.09G059200 Secondary Identifier:  ? PAC:30483409
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G059200 0.5kb upstream 0.5kb upstream 6409 true Chr09: 5468492-5474900 Glycine max
Glyma.09G059200 0.5kb upstream 0.5kb upstream 500 false Chr09: 5468492-5468991 Glycine max
Glyma.09G059200 0.5kb downstream 0.5kb downstream 6409 true Chr09: 5468992-5475400 Glycine max
Glyma.09G059200 0.5kb downstream 0.5kb downstream 500 false Chr09: 5474901-5475400 Glycine max
Glyma.09G059200 1.0kb upstream 1.0kb upstream 6909 true Chr09: 5467992-5474900 Glycine max
Glyma.09G059200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 5467992-5468991 Glycine max
Glyma.09G059200 1.0kb downstream 1.0kb downstream 6909 true Chr09: 5468992-5475900 Glycine max
Glyma.09G059200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 5474901-5475900 Glycine max
Glyma.09G059200 2.0kb upstream 2.0kb upstream 7909 true Chr09: 5466992-5474900 Glycine max
Glyma.09G059200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 5466992-5468991 Glycine max
Glyma.09G059200 2.0kb downstream 2.0kb downstream 7909 true Chr09: 5468992-5476900 Glycine max
Glyma.09G059200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 5474901-5476900 Glycine max
Glyma.09G059200 5.0kb upstream 5.0kb upstream 10909 true Chr09: 5463992-5474900 Glycine max
Glyma.09G059200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 5463992-5468991 Glycine max
Glyma.09G059200 5.0kb downstream 5.0kb downstream 10909 true Chr09: 5468992-5479900 Glycine max
Glyma.09G059200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 5474901-5479900 Glycine max
Glyma.09G059200 10.0kb upstream 10.0kb upstream 15909 true Chr09: 5458992-5474900 Glycine max
Glyma.09G059200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 5458992-5468991 Glycine max
Glyma.09G059200 10.0kb downstream 10.0kb downstream 15909 true Chr09: 5468992-5484900 Glycine max
Glyma.09G059200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 5474901-5484900 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314968 5265 Fabidae View MSA
124063811 5270 Rosid View MSA
123743864 5271 Pentapetalae View MSA
122788044 5272 Eudicot View MSA
122042280 5273 Angiosperm View MSA
121350721 5274 Embryophyte View MSA
123428432 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.10351 0.0 16.4064    
cufflinks 4.04191 0.0 11.1294   Low
cufflinks 11.9801 0.0 32.1178   High
cufflinks 8.71684 0.0 23.2558    
cufflinks 11.3721 0.0 30.4305   High
cufflinks 5.95157 0.0 16.0055    
cufflinks 6.95547 0.0 18.6279    
cufflinks 6.28341 0.0 16.8626    
cufflinks 8.11701 0.0 21.6637    
cufflinks 6.014       High
cufflinks 3.887        
cufflinks 7.249     High High
cufflinks 4.654        
cufflinks 3.781        
cufflinks 4.113        
cufflinks 2.049       Low
cufflinks 2.851        
cufflinks 4.252        
cufflinks 3.056        
cufflinks 1.925       Low
cufflinks 3.252        
cufflinks 2.587        
cufflinks 2.378        
cufflinks 2.747        
cufflinks 1.777       Low
cufflinks 5.186       High

0 Strain