Gene : Glyma.09G109700 G. max Wm82.a2.v1
Defline:  (1 of 58) KOG0483 - Transcription factor HEX, contains HOX and HALZ domains Genomic Order:  1097
Name:  ? Glyma.09G109700 Secondary Identifier:  ? PAC:30484437
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G109700 0.5kb upstream 0.5kb upstream 2997 true Chr09: 21479598-21482594 Glycine max
Glyma.09G109700 0.5kb upstream 0.5kb upstream 500 false Chr09: 21482095-21482594 Glycine max
Glyma.09G109700 0.5kb downstream 0.5kb downstream 2997 true Chr09: 21479098-21482094 Glycine max
Glyma.09G109700 0.5kb downstream 0.5kb downstream 500 false Chr09: 21479098-21479597 Glycine max
Glyma.09G109700 1.0kb upstream 1.0kb upstream 3497 true Chr09: 21479598-21483094 Glycine max
Glyma.09G109700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 21482095-21483094 Glycine max
Glyma.09G109700 1.0kb downstream 1.0kb downstream 3497 true Chr09: 21478598-21482094 Glycine max
Glyma.09G109700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 21478598-21479597 Glycine max
Glyma.09G109700 2.0kb upstream 2.0kb upstream 4497 true Chr09: 21479598-21484094 Glycine max
Glyma.09G109700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 21482095-21484094 Glycine max
Glyma.09G109700 2.0kb downstream 2.0kb downstream 4497 true Chr09: 21477598-21482094 Glycine max
Glyma.09G109700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 21477598-21479597 Glycine max
Glyma.09G109700 5.0kb upstream 5.0kb upstream 7497 true Chr09: 21479598-21487094 Glycine max
Glyma.09G109700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 21482095-21487094 Glycine max
Glyma.09G109700 5.0kb downstream 5.0kb downstream 7497 true Chr09: 21474598-21482094 Glycine max
Glyma.09G109700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 21474598-21479597 Glycine max
Glyma.09G109700 10.0kb upstream 10.0kb upstream 12497 true Chr09: 21479598-21492094 Glycine max
Glyma.09G109700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 21482095-21492094 Glycine max
Glyma.09G109700 10.0kb downstream 10.0kb downstream 12497 true Chr09: 21469598-21482094 Glycine max
Glyma.09G109700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 21469598-21479597 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314066 5265 Fabidae View MSA
124071964 5270 Rosid View MSA
123750745 5271 Pentapetalae View MSA
122796686 5272 Eudicot View MSA
122050134 5273 Angiosperm View MSA
121351534 5274 Embryophyte View MSA
123382211 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.494569 0.0 1.83172   Low
cufflinks 10.1242 0.0 27.5214    
cufflinks 1.40225 0.0 4.83795    
cufflinks 10.7081 0.0 28.9921   High
cufflinks 2.99305 0.0 9.31519    
cufflinks 3.83466 0.0 11.5485    
cufflinks 3.85518 0.0 11.591    
cufflinks 11.4601 0.0 30.8983   High
cufflinks 3.52322 0.0 10.7282    
cufflinks 2.298        
cufflinks 0.803        
cufflinks 1.468        
cufflinks 0.945        
cufflinks 0.58        
cufflinks 0.045     Low Low
cufflinks 3.773        
cufflinks 3.03        
cufflinks 1.265        
cufflinks 7.577     High High
cufflinks 3.365        
cufflinks 3.124        
cufflinks 3.873        
cufflinks 5.619        
cufflinks 1.487        
cufflinks 2.98        
cufflinks 5.573        

0 Strain