Gene : Glyma.09G111900 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR32100:SF13 - OMEGA-6 FATTY ACID DESATURASE, ENDOPLASMIC RETICULUM Genomic Order:  1119
Name:  ? Glyma.09G111900 Secondary Identifier:  ? PAC:30483433
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5995 Glycine max pathologic  
Gmax PWY-762 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G111900 0.5kb upstream 0.5kb upstream 5290 true Chr09: 22174485-22179774 Glycine max
Glyma.09G111900 0.5kb upstream 0.5kb upstream 500 false Chr09: 22179275-22179774 Glycine max
Glyma.09G111900 0.5kb downstream 0.5kb downstream 5290 true Chr09: 22173985-22179274 Glycine max
Glyma.09G111900 0.5kb downstream 0.5kb downstream 500 false Chr09: 22173985-22174484 Glycine max
Glyma.09G111900 1.0kb upstream 1.0kb upstream 5790 true Chr09: 22174485-22180274 Glycine max
Glyma.09G111900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 22179275-22180274 Glycine max
Glyma.09G111900 1.0kb downstream 1.0kb downstream 5790 true Chr09: 22173485-22179274 Glycine max
Glyma.09G111900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 22173485-22174484 Glycine max
Glyma.09G111900 2.0kb upstream 2.0kb upstream 6790 true Chr09: 22174485-22181274 Glycine max
Glyma.09G111900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 22179275-22181274 Glycine max
Glyma.09G111900 2.0kb downstream 2.0kb downstream 6790 true Chr09: 22172485-22179274 Glycine max
Glyma.09G111900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 22172485-22174484 Glycine max
Glyma.09G111900 5.0kb upstream 5.0kb upstream 9790 true Chr09: 22174485-22184274 Glycine max
Glyma.09G111900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 22179275-22184274 Glycine max
Glyma.09G111900 5.0kb downstream 5.0kb downstream 9790 true Chr09: 22169485-22179274 Glycine max
Glyma.09G111900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 22169485-22174484 Glycine max
Glyma.09G111900 10.0kb upstream 10.0kb upstream 14790 true Chr09: 22174485-22189274 Glycine max
Glyma.09G111900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 22179275-22189274 Glycine max
Glyma.09G111900 10.0kb downstream 10.0kb downstream 14790 true Chr09: 22164485-22179274 Glycine max
Glyma.09G111900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 22164485-22174484 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041215 5273 Angiosperm View MSA
122254246 5265 Fabidae View MSA
123996492 5270 Rosid View MSA
123747966 5271 Pentapetalae View MSA
122789327 5272 Eudicot View MSA
121347269 5274 Embryophyte View MSA
123426688 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.53093 0.0 8.4261    
cufflinks 0.0986823 0.0 0.395505 Low Low
cufflinks 9.23588 0.0 25.8397   High
cufflinks 0.319528 0.0 1.22285    
cufflinks 0.483847 0.0 1.81814    
cufflinks 2.43875 0.0 8.13847    
cufflinks 4.94021 0.0 14.9072   High
cufflinks 0.199691 0.0 0.779704 Low Low
cufflinks 0.993271 0.0 3.58953    
cufflinks 0.181        
cufflinks 0.599        
cufflinks 1.036       High
cufflinks 0.068     Low  
cufflinks 0.005     Low Low
cufflinks 0.281        
cufflinks 0.102        
cufflinks 1.379       High
cufflinks 0.968        
cufflinks 0.288        
cufflinks 0.201        
cufflinks 0.058     Low  
cufflinks 0.156        
cufflinks 0.178        
cufflinks 1.215       High
cufflinks 0.122        
cufflinks 1.347       High

0 Strain