Gene : Glyma.09G112200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10799:SF603 - PROTEIN PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 Genomic Order:  1122
Name:  ? Glyma.09G112200 Secondary Identifier:  ? PAC:30486606
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G112200 0.5kb upstream 0.5kb upstream 17089 true Chr09: 22294462-22311550 Glycine max
Glyma.09G112200 0.5kb upstream 0.5kb upstream 500 false Chr09: 22311051-22311550 Glycine max
Glyma.09G112200 0.5kb downstream 0.5kb downstream 17089 true Chr09: 22293962-22311050 Glycine max
Glyma.09G112200 0.5kb downstream 0.5kb downstream 500 false Chr09: 22293962-22294461 Glycine max
Glyma.09G112200 1.0kb upstream 1.0kb upstream 17589 true Chr09: 22294462-22312050 Glycine max
Glyma.09G112200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 22311051-22312050 Glycine max
Glyma.09G112200 1.0kb downstream 1.0kb downstream 17589 true Chr09: 22293462-22311050 Glycine max
Glyma.09G112200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 22293462-22294461 Glycine max
Glyma.09G112200 2.0kb upstream 2.0kb upstream 18589 true Chr09: 22294462-22313050 Glycine max
Glyma.09G112200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 22311051-22313050 Glycine max
Glyma.09G112200 2.0kb downstream 2.0kb downstream 18589 true Chr09: 22292462-22311050 Glycine max
Glyma.09G112200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 22292462-22294461 Glycine max
Glyma.09G112200 5.0kb upstream 5.0kb upstream 21589 true Chr09: 22294462-22316050 Glycine max
Glyma.09G112200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 22311051-22316050 Glycine max
Glyma.09G112200 5.0kb downstream 5.0kb downstream 21589 true Chr09: 22289462-22311050 Glycine max
Glyma.09G112200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 22289462-22294461 Glycine max
Glyma.09G112200 10.0kb upstream 10.0kb upstream 26589 true Chr09: 22294462-22321050 Glycine max
Glyma.09G112200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 22311051-22321050 Glycine max
Glyma.09G112200 10.0kb downstream 10.0kb downstream 26589 true Chr09: 22284462-22311050 Glycine max
Glyma.09G112200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 22284462-22294461 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303183 5265 Fabidae View MSA
124061293 5270 Rosid View MSA
123739512 5271 Pentapetalae View MSA
122790205 5272 Eudicot View MSA
122045682 5273 Angiosperm View MSA
121347848 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.80721 0.0 19.3825    
cufflinks 4.96668 0.0 19.9381    
cufflinks 6.25599 0.0 27.8804   High
cufflinks 4.23232 0.0 18.1994    
cufflinks 4.37202 0.0 17.5195    
cufflinks 3.43739 0.0 17.4834   Low
cufflinks 5.23718 0.0 19.815    
cufflinks 4.03516 0.0 16.3483    
cufflinks 4.77088 0.0 20.6822    
cufflinks 0.293       Low
cufflinks 0.315        
cufflinks 0.469       High
cufflinks 0.39        
cufflinks 0.377        
cufflinks 0.424        
cufflinks 0.404        
cufflinks 0.208       Low
cufflinks 0.479       High
cufflinks 0.499       High
cufflinks 0.387        
cufflinks 0.284       Low
cufflinks 0.432        
cufflinks 0.411        
cufflinks 0.3        
cufflinks 0.387        
cufflinks 0.339        

0 Strain