Gene : Glyma.09G103000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13301//PTHR13301:SF61 - X-BOX TRANSCRIPTION FACTOR-RELATED Genomic Order:  1030
Name:  ? Glyma.09G103000 Secondary Identifier:  ? PAC:30486246
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1001 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G103000 0.5kb upstream 0.5kb upstream 8835 true Chr09: 19046132-19054966 Glycine max
Glyma.09G103000 0.5kb upstream 0.5kb upstream 500 false Chr09: 19054467-19054966 Glycine max
Glyma.09G103000 0.5kb downstream 0.5kb downstream 8835 true Chr09: 19045632-19054466 Glycine max
Glyma.09G103000 0.5kb downstream 0.5kb downstream 500 false Chr09: 19045632-19046131 Glycine max
Glyma.09G103000 1.0kb upstream 1.0kb upstream 9335 true Chr09: 19046132-19055466 Glycine max
Glyma.09G103000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 19054467-19055466 Glycine max
Glyma.09G103000 1.0kb downstream 1.0kb downstream 9335 true Chr09: 19045132-19054466 Glycine max
Glyma.09G103000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 19045132-19046131 Glycine max
Glyma.09G103000 2.0kb upstream 2.0kb upstream 10335 true Chr09: 19046132-19056466 Glycine max
Glyma.09G103000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 19054467-19056466 Glycine max
Glyma.09G103000 2.0kb downstream 2.0kb downstream 10335 true Chr09: 19044132-19054466 Glycine max
Glyma.09G103000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 19044132-19046131 Glycine max
Glyma.09G103000 5.0kb upstream 5.0kb upstream 13335 true Chr09: 19046132-19059466 Glycine max
Glyma.09G103000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 19054467-19059466 Glycine max
Glyma.09G103000 5.0kb downstream 5.0kb downstream 13335 true Chr09: 19041132-19054466 Glycine max
Glyma.09G103000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 19041132-19046131 Glycine max
Glyma.09G103000 10.0kb upstream 10.0kb upstream 18335 true Chr09: 19046132-19064466 Glycine max
Glyma.09G103000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 19054467-19064466 Glycine max
Glyma.09G103000 10.0kb downstream 10.0kb downstream 18335 true Chr09: 19036132-19054466 Glycine max
Glyma.09G103000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 19036132-19046131 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314851 5265 Fabidae View MSA
124068602 5270 Rosid View MSA
123746424 5271 Pentapetalae View MSA
122793475 5272 Eudicot View MSA
122046929 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.86972 0.0 10.7604   Low
cufflinks 13.1131 0.0 46.8799    
cufflinks 2.84898 0.0 9.18074   Low
cufflinks 23.4415 0.0 96.0018 High  
cufflinks 53.7302 0.0 257.655 High High
cufflinks 75.6302 0.0 439.076 High High
cufflinks 7.34523 0.0 25.08    
cufflinks 31.796 0.0 123.644 High  
cufflinks 26.9495 0.0 115.172 High  
cufflinks 18.021     High High
cufflinks 1.244       Low
cufflinks 2.634        
cufflinks 29.829     High High
cufflinks 22.371     High High
cufflinks 1.014       Low
cufflinks 4.867        
cufflinks 7.747     High  
cufflinks 8.922     High  
cufflinks 6.364        
cufflinks 3.016        
cufflinks 3.347        
cufflinks 4.03        
cufflinks 4.006        
cufflinks 1.054       Low
cufflinks 3.147        
cufflinks 7.238     High  

0 Strain