Gene : Glyma.09G103700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10917 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3 Genomic Order:  1037
Name:  ? Glyma.09G103700 Secondary Identifier:  ? PAC:30486061
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G103700 0.5kb upstream 0.5kb upstream 4017 true Chr09: 19213913-19217929 Glycine max
Glyma.09G103700 0.5kb upstream 0.5kb upstream 500 false Chr09: 19213913-19214412 Glycine max
Glyma.09G103700 0.5kb downstream 0.5kb downstream 4017 true Chr09: 19214413-19218429 Glycine max
Glyma.09G103700 0.5kb downstream 0.5kb downstream 500 false Chr09: 19217930-19218429 Glycine max
Glyma.09G103700 1.0kb upstream 1.0kb upstream 4517 true Chr09: 19213413-19217929 Glycine max
Glyma.09G103700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 19213413-19214412 Glycine max
Glyma.09G103700 1.0kb downstream 1.0kb downstream 4517 true Chr09: 19214413-19218929 Glycine max
Glyma.09G103700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 19217930-19218929 Glycine max
Glyma.09G103700 2.0kb upstream 2.0kb upstream 5517 true Chr09: 19212413-19217929 Glycine max
Glyma.09G103700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 19212413-19214412 Glycine max
Glyma.09G103700 2.0kb downstream 2.0kb downstream 5517 true Chr09: 19214413-19219929 Glycine max
Glyma.09G103700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 19217930-19219929 Glycine max
Glyma.09G103700 5.0kb upstream 5.0kb upstream 8517 true Chr09: 19209413-19217929 Glycine max
Glyma.09G103700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 19209413-19214412 Glycine max
Glyma.09G103700 5.0kb downstream 5.0kb downstream 8517 true Chr09: 19214413-19222929 Glycine max
Glyma.09G103700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 19217930-19222929 Glycine max
Glyma.09G103700 10.0kb upstream 10.0kb upstream 13517 true Chr09: 19204413-19217929 Glycine max
Glyma.09G103700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 19204413-19214412 Glycine max
Glyma.09G103700 10.0kb downstream 10.0kb downstream 13517 true Chr09: 19214413-19227929 Glycine max
Glyma.09G103700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 19217930-19227929 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304459 5265 Fabidae View MSA
124064544 5270 Rosid View MSA
123742765 5271 Pentapetalae View MSA
122785974 5272 Eudicot View MSA
122051264 5273 Angiosperm View MSA
121346486 5274 Embryophyte View MSA
123424696 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.7083 0.0 119.593 High  
cufflinks 44.088 0.0 130.027 High  
cufflinks 39.4328 0.0 134.855 High  
cufflinks 32.5735 0.0 112.766 High  
cufflinks 34.9954 0.0 120.97 High  
cufflinks 47.6622 0.0 161.267 High High
cufflinks 25.6747 0.0 92.0524 High Low
cufflinks 46.8237 0.0 158.357 High High
cufflinks 43.4914 0.0 147.171 High  
cufflinks 4.087        
cufflinks 2.308       Low
cufflinks 4.635        
cufflinks 4.288        
cufflinks 3.593        
cufflinks 1.549       Low
cufflinks 4.709        
cufflinks 4.075        
cufflinks 5.731       High
cufflinks 3.662        
cufflinks 4.827        
cufflinks 2.674       Low
cufflinks 4.864        
cufflinks 4.718        
cufflinks 2.848        
cufflinks 5.077        
cufflinks 3.728        

0 Strain