Gene : Glyma.09G091700 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12948 - NEDD8 ULTIMATE BUSTER-1 BS4 PROTEIN Genomic Order:  917
Name:  ? Glyma.09G091700 Secondary Identifier:  ? PAC:30483321
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G091700 0.5kb upstream 0.5kb upstream 7659 true Chr09: 12359874-12367532 Glycine max
Glyma.09G091700 0.5kb upstream 0.5kb upstream 500 false Chr09: 12367033-12367532 Glycine max
Glyma.09G091700 0.5kb downstream 0.5kb downstream 7659 true Chr09: 12359374-12367032 Glycine max
Glyma.09G091700 0.5kb downstream 0.5kb downstream 500 false Chr09: 12359374-12359873 Glycine max
Glyma.09G091700 1.0kb upstream 1.0kb upstream 8159 true Chr09: 12359874-12368032 Glycine max
Glyma.09G091700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 12367033-12368032 Glycine max
Glyma.09G091700 1.0kb downstream 1.0kb downstream 8159 true Chr09: 12358874-12367032 Glycine max
Glyma.09G091700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 12358874-12359873 Glycine max
Glyma.09G091700 2.0kb upstream 2.0kb upstream 9159 true Chr09: 12359874-12369032 Glycine max
Glyma.09G091700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 12367033-12369032 Glycine max
Glyma.09G091700 2.0kb downstream 2.0kb downstream 9159 true Chr09: 12357874-12367032 Glycine max
Glyma.09G091700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 12357874-12359873 Glycine max
Glyma.09G091700 5.0kb upstream 5.0kb upstream 12159 true Chr09: 12359874-12372032 Glycine max
Glyma.09G091700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 12367033-12372032 Glycine max
Glyma.09G091700 5.0kb downstream 5.0kb downstream 12159 true Chr09: 12354874-12367032 Glycine max
Glyma.09G091700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 12354874-12359873 Glycine max
Glyma.09G091700 10.0kb upstream 10.0kb upstream 17159 true Chr09: 12359874-12377032 Glycine max
Glyma.09G091700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 12367033-12377032 Glycine max
Glyma.09G091700 10.0kb downstream 10.0kb downstream 17159 true Chr09: 12349874-12367032 Glycine max
Glyma.09G091700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 12349874-12359873 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303079 5265 Fabidae View MSA
124064504 5270 Rosid View MSA
123740631 5271 Pentapetalae View MSA
122788504 5272 Eudicot View MSA
122046197 5273 Angiosperm View MSA
123429148 5275 Viridiplantae View MSA
121344011 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.19901 0.0 11.8959   Low
cufflinks 4.57067 0.0 12.8435    
cufflinks 5.9075 0.0 16.2163    
cufflinks 6.38329 0.0 17.4293   High
cufflinks 5.68277 0.0 15.6388    
cufflinks 4.58373 0.0 12.8834    
cufflinks 5.93906 0.0 16.3126    
cufflinks 4.8482 0.0 13.5273    
cufflinks 6.71227 0.0 18.2697   High
cufflinks 1.504        
cufflinks 3.275       High
cufflinks 2.033        
cufflinks 1.203       Low
cufflinks 0.911       Low
cufflinks 5.535     High High
cufflinks 1.669        
cufflinks 1.503        
cufflinks 1.74        
cufflinks 2.003        
cufflinks 1.765        
cufflinks 2.64        
cufflinks 1.659        
cufflinks 1.215       Low
cufflinks 2.303        
cufflinks 1.64        
cufflinks 2.032        

0 Strain