Gene : Glyma.09G099000 G. max Wm82.a2.v1
Defline:  (1 of 44) PF00643 - B-box zinc finger (zf-B_box) Genomic Order:  990
Name:  ? Glyma.09G099000 Secondary Identifier:  ? PAC:30486668
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G099000 0.5kb upstream 0.5kb upstream 4139 true Chr09: 17582481-17586619 Glycine max
Glyma.09G099000 0.5kb upstream 0.5kb upstream 500 false Chr09: 17586120-17586619 Glycine max
Glyma.09G099000 0.5kb downstream 0.5kb downstream 4139 true Chr09: 17581981-17586119 Glycine max
Glyma.09G099000 0.5kb downstream 0.5kb downstream 500 false Chr09: 17581981-17582480 Glycine max
Glyma.09G099000 1.0kb upstream 1.0kb upstream 4639 true Chr09: 17582481-17587119 Glycine max
Glyma.09G099000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 17586120-17587119 Glycine max
Glyma.09G099000 1.0kb downstream 1.0kb downstream 4639 true Chr09: 17581481-17586119 Glycine max
Glyma.09G099000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 17581481-17582480 Glycine max
Glyma.09G099000 2.0kb upstream 2.0kb upstream 5639 true Chr09: 17582481-17588119 Glycine max
Glyma.09G099000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 17586120-17588119 Glycine max
Glyma.09G099000 2.0kb downstream 2.0kb downstream 5639 true Chr09: 17580481-17586119 Glycine max
Glyma.09G099000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 17580481-17582480 Glycine max
Glyma.09G099000 5.0kb upstream 5.0kb upstream 8639 true Chr09: 17582481-17591119 Glycine max
Glyma.09G099000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 17586120-17591119 Glycine max
Glyma.09G099000 5.0kb downstream 5.0kb downstream 8639 true Chr09: 17577481-17586119 Glycine max
Glyma.09G099000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 17577481-17582480 Glycine max
Glyma.09G099000 10.0kb upstream 10.0kb upstream 13639 true Chr09: 17582481-17596119 Glycine max
Glyma.09G099000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 17586120-17596119 Glycine max
Glyma.09G099000 10.0kb downstream 10.0kb downstream 13639 true Chr09: 17572481-17586119 Glycine max
Glyma.09G099000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 17572481-17582480 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309983 5265 Fabidae View MSA
124060645 5270 Rosid View MSA
123746577 5271 Pentapetalae View MSA
122790367 5272 Eudicot View MSA
122043422 5273 Angiosperm View MSA
121350336 5274 Embryophyte View MSA
123427282 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.431 0.0 70.5166 High High
cufflinks 10.5815 0.0 29.474    
cufflinks 12.2721 0.0 33.7446    
cufflinks 9.951 0.0 27.8941    
cufflinks 5.7848 0.0 17.3154   Low
cufflinks 15.3667 0.0 41.6376    
cufflinks 7.02979 0.0 20.5218    
cufflinks 11.9302 0.0 32.8584    
cufflinks 6.4993 0.0 19.1196   Low
cufflinks 5.224        
cufflinks 1.99        
cufflinks 4.762        
cufflinks 1.215       Low
cufflinks 0.767       Low
cufflinks 0.636       Low
cufflinks 4.485        
cufflinks 5.696       High
cufflinks 2.372        
cufflinks 2.832        
cufflinks 5.488        
cufflinks 1.811        
cufflinks 5.378        
cufflinks 5.415        
cufflinks 2.881        
cufflinks 4.647        
cufflinks 2.127        

0 Strain