Gene : Glyma.09G085300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11827 - SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS Genomic Order:  853
Name:  ? Glyma.09G085300 Secondary Identifier:  ? PAC:30486026
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G085300 0.5kb upstream 0.5kb upstream 33724 true Chr09: 10434279-10468002 Glycine max
Glyma.09G085300 0.5kb upstream 0.5kb upstream 500 false Chr09: 10434279-10434778 Glycine max
Glyma.09G085300 0.5kb downstream 0.5kb downstream 33724 true Chr09: 10434779-10468502 Glycine max
Glyma.09G085300 0.5kb downstream 0.5kb downstream 500 false Chr09: 10468003-10468502 Glycine max
Glyma.09G085300 1.0kb upstream 1.0kb upstream 34224 true Chr09: 10433779-10468002 Glycine max
Glyma.09G085300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 10433779-10434778 Glycine max
Glyma.09G085300 1.0kb downstream 1.0kb downstream 34224 true Chr09: 10434779-10469002 Glycine max
Glyma.09G085300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 10468003-10469002 Glycine max
Glyma.09G085300 2.0kb upstream 2.0kb upstream 35224 true Chr09: 10432779-10468002 Glycine max
Glyma.09G085300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 10432779-10434778 Glycine max
Glyma.09G085300 2.0kb downstream 2.0kb downstream 35224 true Chr09: 10434779-10470002 Glycine max
Glyma.09G085300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 10468003-10470002 Glycine max
Glyma.09G085300 5.0kb upstream 5.0kb upstream 38224 true Chr09: 10429779-10468002 Glycine max
Glyma.09G085300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 10429779-10434778 Glycine max
Glyma.09G085300 5.0kb downstream 5.0kb downstream 38224 true Chr09: 10434779-10473002 Glycine max
Glyma.09G085300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 10468003-10473002 Glycine max
Glyma.09G085300 10.0kb upstream 10.0kb upstream 43224 true Chr09: 10424779-10468002 Glycine max
Glyma.09G085300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 10424779-10434778 Glycine max
Glyma.09G085300 10.0kb downstream 10.0kb downstream 43224 true Chr09: 10434779-10478002 Glycine max
Glyma.09G085300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 10468003-10478002 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307906 5265 Fabidae View MSA
124066171 5270 Rosid View MSA
123736860 5271 Pentapetalae View MSA
122786911 5272 Eudicot View MSA
122042525 5273 Angiosperm View MSA
121347955 5274 Embryophyte View MSA
123428198 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.82585 0.0 23.5513    
cufflinks 7.38544 0.0 19.7644    
cufflinks 4.38925 0.0 12.0443   Low
cufflinks 8.57009 0.0 22.8736    
cufflinks 10.998 0.0 29.3788   High
cufflinks 9.34675 0.0 24.936    
cufflinks 6.14747 0.0 16.5612    
cufflinks 8.97398 0.0 23.9441    
cufflinks 6.78065 0.0 18.1843    
cufflinks 1.379       High
cufflinks 0.621       Low
cufflinks 0.597       Low
cufflinks 1.245       High
cufflinks 1.462       High
cufflinks 0.515       Low
cufflinks 0.879        
cufflinks 0.663        
cufflinks 1.071        
cufflinks 1.146        
cufflinks 0.673        
cufflinks 0.985        
cufflinks 0.831        
cufflinks 0.882        
cufflinks 0.825        
cufflinks 0.71        
cufflinks 0.699        

0 Strain