Gene : Glyma.09G148900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10584//PTHR10584:SF200 - SUGAR KINASE Genomic Order:  1489
Name:  ? Glyma.09G148900 Secondary Identifier:  ? PAC:30486716
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-3801 Glycine max pathologic  
Gmax PWY-4101 Glycine max pathologic  
Gmax PWY-621 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G148900 0.5kb upstream 0.5kb upstream 5076 true Chr09: 36799778-36804853 Glycine max
Glyma.09G148900 0.5kb upstream 0.5kb upstream 500 false Chr09: 36804354-36804853 Glycine max
Glyma.09G148900 0.5kb downstream 0.5kb downstream 5076 true Chr09: 36799278-36804353 Glycine max
Glyma.09G148900 0.5kb downstream 0.5kb downstream 500 false Chr09: 36799278-36799777 Glycine max
Glyma.09G148900 1.0kb upstream 1.0kb upstream 5576 true Chr09: 36799778-36805353 Glycine max
Glyma.09G148900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 36804354-36805353 Glycine max
Glyma.09G148900 1.0kb downstream 1.0kb downstream 5576 true Chr09: 36798778-36804353 Glycine max
Glyma.09G148900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 36798778-36799777 Glycine max
Glyma.09G148900 2.0kb upstream 2.0kb upstream 6576 true Chr09: 36799778-36806353 Glycine max
Glyma.09G148900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 36804354-36806353 Glycine max
Glyma.09G148900 2.0kb downstream 2.0kb downstream 6576 true Chr09: 36797778-36804353 Glycine max
Glyma.09G148900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 36797778-36799777 Glycine max
Glyma.09G148900 5.0kb upstream 5.0kb upstream 9576 true Chr09: 36799778-36809353 Glycine max
Glyma.09G148900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 36804354-36809353 Glycine max
Glyma.09G148900 5.0kb downstream 5.0kb downstream 9576 true Chr09: 36794778-36804353 Glycine max
Glyma.09G148900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 36794778-36799777 Glycine max
Glyma.09G148900 10.0kb upstream 10.0kb upstream 14576 true Chr09: 36799778-36814353 Glycine max
Glyma.09G148900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 36804354-36814353 Glycine max
Glyma.09G148900 10.0kb downstream 10.0kb downstream 14576 true Chr09: 36789778-36804353 Glycine max
Glyma.09G148900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 36789778-36799777 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310303 5265 Fabidae View MSA
124069533 5270 Rosid View MSA
123742774 5271 Pentapetalae View MSA
122790590 5272 Eudicot View MSA
122045850 5273 Angiosperm View MSA
121350713 5274 Embryophyte View MSA
123424695 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.6167 0.0 20.9482    
cufflinks 3.31437 0.0 21.6861    
cufflinks 0.844803 0.0 6.28926   Low
cufflinks 2.349 0.0 17.565    
cufflinks 6.21098 0.0 34.1541    
cufflinks 1.7985 0.0 12.7049    
cufflinks 3.02292 0.0 21.5382    
cufflinks 6.93881 0.0 33.8234    
cufflinks 11.639 0.0 63.7237   High
cufflinks 0.177       Low
cufflinks 1.689       High
cufflinks 0.124       Low
cufflinks 0.242        
cufflinks 0.668        
cufflinks 2.414       High
cufflinks 0.296        
cufflinks 0.775        
cufflinks 0.208        
cufflinks 0.36        
cufflinks 0.207        
cufflinks 3.512       High
cufflinks 0.288        
cufflinks 0.436        
cufflinks 0.775        
cufflinks 0.242        
cufflinks 3.04       High

0 Strain