Gene : Glyma.09G138000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR33649:SF2 - PAR1 PROTEIN Genomic Order:  1380
Name:  ? Glyma.09G138000 Secondary Identifier:  ? PAC:30482689
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G138000 0.5kb upstream 0.5kb upstream 3579 true Chr09: 34280893-34284471 Glycine max
Glyma.09G138000 0.5kb upstream 0.5kb upstream 500 false Chr09: 34283972-34284471 Glycine max
Glyma.09G138000 0.5kb downstream 0.5kb downstream 3579 true Chr09: 34280393-34283971 Glycine max
Glyma.09G138000 0.5kb downstream 0.5kb downstream 500 false Chr09: 34280393-34280892 Glycine max
Glyma.09G138000 1.0kb upstream 1.0kb upstream 4079 true Chr09: 34280893-34284971 Glycine max
Glyma.09G138000 1.0kb upstream 1.0kb upstream 1000 false Chr09: 34283972-34284971 Glycine max
Glyma.09G138000 1.0kb downstream 1.0kb downstream 4079 true Chr09: 34279893-34283971 Glycine max
Glyma.09G138000 1.0kb downstream 1.0kb downstream 1000 false Chr09: 34279893-34280892 Glycine max
Glyma.09G138000 2.0kb upstream 2.0kb upstream 5079 true Chr09: 34280893-34285971 Glycine max
Glyma.09G138000 2.0kb upstream 2.0kb upstream 2000 false Chr09: 34283972-34285971 Glycine max
Glyma.09G138000 2.0kb downstream 2.0kb downstream 5079 true Chr09: 34278893-34283971 Glycine max
Glyma.09G138000 2.0kb downstream 2.0kb downstream 2000 false Chr09: 34278893-34280892 Glycine max
Glyma.09G138000 5.0kb upstream 5.0kb upstream 8079 true Chr09: 34280893-34288971 Glycine max
Glyma.09G138000 5.0kb upstream 5.0kb upstream 5000 false Chr09: 34283972-34288971 Glycine max
Glyma.09G138000 5.0kb downstream 5.0kb downstream 8079 true Chr09: 34275893-34283971 Glycine max
Glyma.09G138000 5.0kb downstream 5.0kb downstream 5000 false Chr09: 34275893-34280892 Glycine max
Glyma.09G138000 10.0kb upstream 10.0kb upstream 13079 true Chr09: 34280893-34293971 Glycine max
Glyma.09G138000 10.0kb upstream 10.0kb upstream 10000 false Chr09: 34283972-34293971 Glycine max
Glyma.09G138000 10.0kb downstream 10.0kb downstream 13079 true Chr09: 34270893-34283971 Glycine max
Glyma.09G138000 10.0kb downstream 10.0kb downstream 10000 false Chr09: 34270893-34280892 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311543 5265 Fabidae View MSA
124062398 5270 Rosid View MSA
123740703 5271 Pentapetalae View MSA
122795760 5272 Eudicot View MSA
122048533 5273 Angiosperm View MSA
121349553 5274 Embryophyte View MSA
123381353 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.237202 0.0 0.928944    
cufflinks 0.231402 0.0 0.907216 Low  
cufflinks 70.7712 0.0 195.459 High High
cufflinks 28.7472 0.0 76.718 High High
cufflinks 0.0181345 0.0 0.0833128 Low Low
cufflinks 1.12317 0.0 4.09405    
cufflinks 0.410458 0.0 1.57008    
cufflinks 9.3253 0.0 26.8013    
cufflinks 0.300608 0.0 1.16618    
cufflinks 0.028     Low  
cufflinks 0.205        
cufflinks 5.593       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.025     Low  
cufflinks 0.007     Low Low
cufflinks 0.052     Low  
cufflinks 0.137        
cufflinks 0.068     Low  
cufflinks 0.012     Low  
cufflinks 0.019     Low  
cufflinks 0.009     Low  
cufflinks 0.012     Low  
cufflinks 0.038     Low  
cufflinks 0.013     Low  
cufflinks 0.283       High

0 Strain