Gene : Glyma.09G138400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11655:SF14 - 54S RIBOSOMAL PROTEIN L6, MITOCHONDRIAL Genomic Order:  1384
Name:  ? Glyma.09G138400 Secondary Identifier:  ? PAC:30483369
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G138400 0.5kb upstream 0.5kb upstream 4212 true Chr09: 34389300-34393511 Glycine max
Glyma.09G138400 0.5kb upstream 0.5kb upstream 500 false Chr09: 34393012-34393511 Glycine max
Glyma.09G138400 0.5kb downstream 0.5kb downstream 4212 true Chr09: 34388800-34393011 Glycine max
Glyma.09G138400 0.5kb downstream 0.5kb downstream 500 false Chr09: 34388800-34389299 Glycine max
Glyma.09G138400 1.0kb upstream 1.0kb upstream 4712 true Chr09: 34389300-34394011 Glycine max
Glyma.09G138400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 34393012-34394011 Glycine max
Glyma.09G138400 1.0kb downstream 1.0kb downstream 4712 true Chr09: 34388300-34393011 Glycine max
Glyma.09G138400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 34388300-34389299 Glycine max
Glyma.09G138400 2.0kb upstream 2.0kb upstream 5712 true Chr09: 34389300-34395011 Glycine max
Glyma.09G138400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 34393012-34395011 Glycine max
Glyma.09G138400 2.0kb downstream 2.0kb downstream 5712 true Chr09: 34387300-34393011 Glycine max
Glyma.09G138400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 34387300-34389299 Glycine max
Glyma.09G138400 5.0kb upstream 5.0kb upstream 8712 true Chr09: 34389300-34398011 Glycine max
Glyma.09G138400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 34393012-34398011 Glycine max
Glyma.09G138400 5.0kb downstream 5.0kb downstream 8712 true Chr09: 34384300-34393011 Glycine max
Glyma.09G138400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 34384300-34389299 Glycine max
Glyma.09G138400 10.0kb upstream 10.0kb upstream 13712 true Chr09: 34389300-34403011 Glycine max
Glyma.09G138400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 34393012-34403011 Glycine max
Glyma.09G138400 10.0kb downstream 10.0kb downstream 13712 true Chr09: 34379300-34393011 Glycine max
Glyma.09G138400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 34379300-34389299 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303745 5265 Fabidae View MSA
124063333 5270 Rosid View MSA
123740010 5271 Pentapetalae View MSA
122786185 5272 Eudicot View MSA
122045909 5273 Angiosperm View MSA
121344403 5274 Embryophyte View MSA
123424152 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.4956 0.0 32.1423    
cufflinks 28.1728 0.0 75.1725 High High
cufflinks 4.42424 0.0 13.9067    
cufflinks 4.26353 0.0 13.5024    
cufflinks 4.81146 0.0 15.0216    
cufflinks 5.60489 0.0 17.132    
cufflinks 6.21004 0.0 18.696    
cufflinks 6.31191 0.0 18.8916    
cufflinks 2.76307 0.0 9.28343   Low
cufflinks 4.436        
cufflinks 0.688        
cufflinks 2.596        
cufflinks 1.371        
cufflinks 1.598        
cufflinks 0.503       Low
cufflinks 26.69     High High
cufflinks 0.42       Low
cufflinks 2.802        
cufflinks 6.884        
cufflinks 29.192     High High
cufflinks 0.719        
cufflinks 25.742     High High
cufflinks 29.823     High High
cufflinks 0.573       Low
cufflinks 29.357     High High
cufflinks 0.601       Low

0 Strain