Gene : Glyma.09G123600 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR33077:SF7 - PROTEIN TIFY 6A-RELATED Genomic Order:  1236
Name:  ? Glyma.09G123600 Secondary Identifier:  ? PAC:30482854
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G123600 0.5kb upstream 0.5kb upstream 4080 true Chr09: 29933116-29937195 Glycine max
Glyma.09G123600 0.5kb upstream 0.5kb upstream 500 false Chr09: 29936696-29937195 Glycine max
Glyma.09G123600 0.5kb downstream 0.5kb downstream 4080 true Chr09: 29932616-29936695 Glycine max
Glyma.09G123600 0.5kb downstream 0.5kb downstream 500 false Chr09: 29932616-29933115 Glycine max
Glyma.09G123600 1.0kb upstream 1.0kb upstream 4580 true Chr09: 29933116-29937695 Glycine max
Glyma.09G123600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 29936696-29937695 Glycine max
Glyma.09G123600 1.0kb downstream 1.0kb downstream 4580 true Chr09: 29932116-29936695 Glycine max
Glyma.09G123600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 29932116-29933115 Glycine max
Glyma.09G123600 2.0kb upstream 2.0kb upstream 5580 true Chr09: 29933116-29938695 Glycine max
Glyma.09G123600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 29936696-29938695 Glycine max
Glyma.09G123600 2.0kb downstream 2.0kb downstream 5580 true Chr09: 29931116-29936695 Glycine max
Glyma.09G123600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 29931116-29933115 Glycine max
Glyma.09G123600 5.0kb upstream 5.0kb upstream 8580 true Chr09: 29933116-29941695 Glycine max
Glyma.09G123600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 29936696-29941695 Glycine max
Glyma.09G123600 5.0kb downstream 5.0kb downstream 8580 true Chr09: 29928116-29936695 Glycine max
Glyma.09G123600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 29928116-29933115 Glycine max
Glyma.09G123600 10.0kb upstream 10.0kb upstream 13580 true Chr09: 29933116-29946695 Glycine max
Glyma.09G123600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 29936696-29946695 Glycine max
Glyma.09G123600 10.0kb downstream 10.0kb downstream 13580 true Chr09: 29923116-29936695 Glycine max
Glyma.09G123600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 29923116-29933115 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307775 5265 Fabidae View MSA
124069468 5270 Rosid View MSA
123746675 5271 Pentapetalae View MSA
122792842 5272 Eudicot View MSA
122042775 5273 Angiosperm View MSA
121351436 5274 Embryophyte View MSA
123382165 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 113.514 0.0 340.907 High High
cufflinks 35.8982 0.0 96.3183 High  
cufflinks 117.697 0.0 358.125 High High
cufflinks 57.0736 0.0 157.691 High  
cufflinks 31.0998 0.0 83.1141 High  
cufflinks 37.4593 0.0 100.719 High  
cufflinks 18.5352 0.0 49.745   Low
cufflinks 77.5226 0.0 221.259 High  
cufflinks 25.5444 0.0 68.1491 High  
cufflinks 39.217     High  
cufflinks 22.427     High  
cufflinks 35.052     High  
cufflinks 5.309       Low
cufflinks 5.138       Low
cufflinks 24.786     High  
cufflinks 25.706     High  
cufflinks 27.605     High  
cufflinks 37.307     High  
cufflinks 22.883     High  
cufflinks 36.735     High  
cufflinks 23.392     High  
cufflinks 37.458     High  
cufflinks 68.287     High High
cufflinks 25.326     High  
cufflinks 32.486     High  
cufflinks 25.846     High  

0 Strain