Gene : Glyma.09G128800 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR22904:SF344 - PROTEIN SGT1 HOMOLOG A-RELATED Genomic Order:  1288
Name:  ? Glyma.09G128800 Secondary Identifier:  ? PAC:30482746
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G128800 0.5kb upstream 0.5kb upstream 4722 true Chr09: 32182557-32187278 Glycine max
Glyma.09G128800 0.5kb upstream 0.5kb upstream 500 false Chr09: 32186779-32187278 Glycine max
Glyma.09G128800 0.5kb downstream 0.5kb downstream 4722 true Chr09: 32182057-32186778 Glycine max
Glyma.09G128800 0.5kb downstream 0.5kb downstream 500 false Chr09: 32182057-32182556 Glycine max
Glyma.09G128800 1.0kb upstream 1.0kb upstream 5222 true Chr09: 32182557-32187778 Glycine max
Glyma.09G128800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 32186779-32187778 Glycine max
Glyma.09G128800 1.0kb downstream 1.0kb downstream 5222 true Chr09: 32181557-32186778 Glycine max
Glyma.09G128800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 32181557-32182556 Glycine max
Glyma.09G128800 2.0kb upstream 2.0kb upstream 6222 true Chr09: 32182557-32188778 Glycine max
Glyma.09G128800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 32186779-32188778 Glycine max
Glyma.09G128800 2.0kb downstream 2.0kb downstream 6222 true Chr09: 32180557-32186778 Glycine max
Glyma.09G128800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 32180557-32182556 Glycine max
Glyma.09G128800 5.0kb upstream 5.0kb upstream 9222 true Chr09: 32182557-32191778 Glycine max
Glyma.09G128800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 32186779-32191778 Glycine max
Glyma.09G128800 5.0kb downstream 5.0kb downstream 9222 true Chr09: 32177557-32186778 Glycine max
Glyma.09G128800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 32177557-32182556 Glycine max
Glyma.09G128800 10.0kb upstream 10.0kb upstream 14222 true Chr09: 32182557-32196778 Glycine max
Glyma.09G128800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 32186779-32196778 Glycine max
Glyma.09G128800 10.0kb downstream 10.0kb downstream 14222 true Chr09: 32172557-32186778 Glycine max
Glyma.09G128800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 32172557-32182556 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301587 5265 Fabidae View MSA
124060578 5270 Rosid View MSA
123738666 5271 Pentapetalae View MSA
122791362 5272 Eudicot View MSA
122047508 5273 Angiosperm View MSA
121345317 5274 Embryophyte View MSA
123426836 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.6478 0.0 108.766 High  
cufflinks 30.3257 0.0 81.8908 High  
cufflinks 25.873 0.0 69.4097 High  
cufflinks 29.1818 0.0 78.6629 High  
cufflinks 24.3114 0.0 65.0258 High  
cufflinks 53.9679 0.0 152.588 High High
cufflinks 14.9044 0.0 39.9191   Low
cufflinks 30.7313 0.0 83.1283 High  
cufflinks 36.4726 0.0 99.5264 High  
cufflinks 12.969     High  
cufflinks 11.075     High  
cufflinks 14.832     High  
cufflinks 19.54     High High
cufflinks 10.765     High  
cufflinks 6.19     High Low
cufflinks 14.398     High  
cufflinks 13.825     High  
cufflinks 12.33     High  
cufflinks 15.268     High  
cufflinks 10.62     High  
cufflinks 13.56     High  
cufflinks 13.937     High  
cufflinks 15.004     High  
cufflinks 14.326     High  
cufflinks 9.904     High Low
cufflinks 17.307     High High

0 Strain