Gene : Glyma.09G129300 G. max Wm82.a2.v1
Defline:  (1 of 7) PF04278 - Tic22-like family (Tic22) Genomic Order:  1293
Name:  ? Glyma.09G129300 Secondary Identifier:  ? PAC:30484312
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G129300 0.5kb upstream 0.5kb upstream 8421 true Chr09: 32389819-32398239 Glycine max
Glyma.09G129300 0.5kb upstream 0.5kb upstream 500 false Chr09: 32397740-32398239 Glycine max
Glyma.09G129300 0.5kb downstream 0.5kb downstream 8421 true Chr09: 32389319-32397739 Glycine max
Glyma.09G129300 0.5kb downstream 0.5kb downstream 500 false Chr09: 32389319-32389818 Glycine max
Glyma.09G129300 1.0kb upstream 1.0kb upstream 8921 true Chr09: 32389819-32398739 Glycine max
Glyma.09G129300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 32397740-32398739 Glycine max
Glyma.09G129300 1.0kb downstream 1.0kb downstream 8921 true Chr09: 32388819-32397739 Glycine max
Glyma.09G129300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 32388819-32389818 Glycine max
Glyma.09G129300 2.0kb upstream 2.0kb upstream 9921 true Chr09: 32389819-32399739 Glycine max
Glyma.09G129300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 32397740-32399739 Glycine max
Glyma.09G129300 2.0kb downstream 2.0kb downstream 9921 true Chr09: 32387819-32397739 Glycine max
Glyma.09G129300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 32387819-32389818 Glycine max
Glyma.09G129300 5.0kb upstream 5.0kb upstream 12921 true Chr09: 32389819-32402739 Glycine max
Glyma.09G129300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 32397740-32402739 Glycine max
Glyma.09G129300 5.0kb downstream 5.0kb downstream 12921 true Chr09: 32384819-32397739 Glycine max
Glyma.09G129300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 32384819-32389818 Glycine max
Glyma.09G129300 10.0kb upstream 10.0kb upstream 17921 true Chr09: 32389819-32407739 Glycine max
Glyma.09G129300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 32397740-32407739 Glycine max
Glyma.09G129300 10.0kb downstream 10.0kb downstream 17921 true Chr09: 32379819-32397739 Glycine max
Glyma.09G129300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 32379819-32389818 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304584 5265 Fabidae View MSA
124063444 5270 Rosid View MSA
123744483 5271 Pentapetalae View MSA
122790475 5272 Eudicot View MSA
122047380 5273 Angiosperm View MSA
121344233 5274 Embryophyte View MSA
123380010 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.1322 0.0 48.4454   High
cufflinks 5.0273 0.0 14.2827    
cufflinks 5.2451 0.0 14.8328    
cufflinks 6.49397 0.0 17.9695    
cufflinks 5.9814 0.0 16.6664    
cufflinks 3.67421 0.0 10.8436   Low
cufflinks 5.2961 0.0 14.9723    
cufflinks 5.78353 0.0 16.1814    
cufflinks 5.16438 0.0 14.6197    
cufflinks 1.188       Low
cufflinks 1.398        
cufflinks 1.534        
cufflinks 1.053       Low
cufflinks 1.188       Low
cufflinks 1.673        
cufflinks 1.933        
cufflinks 0.999       Low
cufflinks 1.494        
cufflinks 1.69        
cufflinks 1.982       High
cufflinks 1.557        
cufflinks 2.007       High
cufflinks 2.362       High
cufflinks 1.608        
cufflinks 1.911        
cufflinks 1.276        

0 Strain