Gene : Glyma.09G130500 G. max Wm82.a2.v1
Defline:  (1 of 17) PTHR22814:SF129 - COPPER TRANSPORT FAMILY PROTEIN-RELATED Genomic Order:  1305
Name:  ? Glyma.09G130500 Secondary Identifier:  ? PAC:30483732
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G130500 0.5kb upstream 0.5kb upstream 1565 true Chr09: 32523591-32525155 Glycine max
Glyma.09G130500 0.5kb upstream 0.5kb upstream 500 false Chr09: 32524656-32525155 Glycine max
Glyma.09G130500 0.5kb downstream 0.5kb downstream 1565 true Chr09: 32523091-32524655 Glycine max
Glyma.09G130500 0.5kb downstream 0.5kb downstream 500 false Chr09: 32523091-32523590 Glycine max
Glyma.09G130500 1.0kb upstream 1.0kb upstream 2065 true Chr09: 32523591-32525655 Glycine max
Glyma.09G130500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 32524656-32525655 Glycine max
Glyma.09G130500 1.0kb downstream 1.0kb downstream 2065 true Chr09: 32522591-32524655 Glycine max
Glyma.09G130500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 32522591-32523590 Glycine max
Glyma.09G130500 2.0kb upstream 2.0kb upstream 3065 true Chr09: 32523591-32526655 Glycine max
Glyma.09G130500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 32524656-32526655 Glycine max
Glyma.09G130500 2.0kb downstream 2.0kb downstream 3065 true Chr09: 32521591-32524655 Glycine max
Glyma.09G130500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 32521591-32523590 Glycine max
Glyma.09G130500 5.0kb upstream 5.0kb upstream 6065 true Chr09: 32523591-32529655 Glycine max
Glyma.09G130500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 32524656-32529655 Glycine max
Glyma.09G130500 5.0kb downstream 5.0kb downstream 6065 true Chr09: 32518591-32524655 Glycine max
Glyma.09G130500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 32518591-32523590 Glycine max
Glyma.09G130500 10.0kb upstream 10.0kb upstream 11065 true Chr09: 32523591-32534655 Glycine max
Glyma.09G130500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 32524656-32534655 Glycine max
Glyma.09G130500 10.0kb downstream 10.0kb downstream 11065 true Chr09: 32513591-32524655 Glycine max
Glyma.09G130500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 32513591-32523590 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298597 5265 Fabidae View MSA
124072200 5270 Rosid View MSA
123751300 5271 Pentapetalae View MSA
122793053 5272 Eudicot View MSA
122051560 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.01873 0.0 22.7656   High
cufflinks 0.923048 0.0 3.4953    
cufflinks 4.6959 0.0 15.8955    
cufflinks 1.66051 0.0 6.11064    
cufflinks 0.597603 0.0 2.30959    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0350063 0.0 0.160336 Low Low
cufflinks 2.66595 0.0 9.5201    
cufflinks 0.376305 0.0 1.47894    
cufflinks 35.589     High High
cufflinks 5.507     High  
cufflinks 31.641     High High
cufflinks 2.431        
cufflinks 0.211       Low
cufflinks 4.754        
cufflinks 15.072     High  
cufflinks 11.042     High  
cufflinks 43.016     High High
cufflinks 4.174        
cufflinks 3.94        
cufflinks 1.927        
cufflinks 6.459        
cufflinks 12.641     High  
cufflinks 1.139       Low
cufflinks 3.775        
cufflinks 2.82        

0 Strain