Gene : Glyma.09G132300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13696:SF1 - SEPTUM SITE-DETERMINING PROTEIN MIND HOMOLOG, CHLOROPLASTIC-RELATED Genomic Order:  1323
Name:  ? Glyma.09G132300 Secondary Identifier:  ? PAC:30483745
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G132300 0.5kb upstream 0.5kb upstream 2203 true Chr09: 32979802-32982004 Glycine max
Glyma.09G132300 0.5kb upstream 0.5kb upstream 500 false Chr09: 32981505-32982004 Glycine max
Glyma.09G132300 0.5kb downstream 0.5kb downstream 2203 true Chr09: 32979302-32981504 Glycine max
Glyma.09G132300 0.5kb downstream 0.5kb downstream 500 false Chr09: 32979302-32979801 Glycine max
Glyma.09G132300 1.0kb upstream 1.0kb upstream 2703 true Chr09: 32979802-32982504 Glycine max
Glyma.09G132300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 32981505-32982504 Glycine max
Glyma.09G132300 1.0kb downstream 1.0kb downstream 2703 true Chr09: 32978802-32981504 Glycine max
Glyma.09G132300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 32978802-32979801 Glycine max
Glyma.09G132300 2.0kb upstream 2.0kb upstream 3703 true Chr09: 32979802-32983504 Glycine max
Glyma.09G132300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 32981505-32983504 Glycine max
Glyma.09G132300 2.0kb downstream 2.0kb downstream 3703 true Chr09: 32977802-32981504 Glycine max
Glyma.09G132300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 32977802-32979801 Glycine max
Glyma.09G132300 5.0kb upstream 5.0kb upstream 6703 true Chr09: 32979802-32986504 Glycine max
Glyma.09G132300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 32981505-32986504 Glycine max
Glyma.09G132300 5.0kb downstream 5.0kb downstream 6703 true Chr09: 32974802-32981504 Glycine max
Glyma.09G132300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 32974802-32979801 Glycine max
Glyma.09G132300 10.0kb upstream 10.0kb upstream 11703 true Chr09: 32979802-32991504 Glycine max
Glyma.09G132300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 32981505-32991504 Glycine max
Glyma.09G132300 10.0kb downstream 10.0kb downstream 11703 true Chr09: 32969802-32981504 Glycine max
Glyma.09G132300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 32969802-32979801 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309065 5265 Fabidae View MSA
124063209 5270 Rosid View MSA
123737369 5271 Pentapetalae View MSA
122788241 5272 Eudicot View MSA
122045379 5273 Angiosperm View MSA
121344611 5274 Embryophyte View MSA
123425268 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.11781 0.0 12.5948    
cufflinks 6.11539 0.0 17.7945   High
cufflinks 3.15435 0.0 10.1639    
cufflinks 3.4452 0.0 10.8411    
cufflinks 2.22896 0.0 7.35962    
cufflinks 0.665337 0.0 2.44656   Low
cufflinks 4.6525 0.0 13.9179    
cufflinks 3.00726 0.0 9.62934    
cufflinks 2.0671 0.0 6.93713    
cufflinks 1.117        
cufflinks 0.031     Low Low
cufflinks 1.313        
cufflinks 0.718        
cufflinks 0.704        
cufflinks 0.147       Low
cufflinks 1.956        
cufflinks 0.448        
cufflinks 1.542        
cufflinks 3.218       High
cufflinks 2.233        
cufflinks 0.064       Low
cufflinks 2.342        
cufflinks 3.089       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.973        
cufflinks 0.151       Low

0 Strain