Gene : Glyma.09G114600 G. max Wm82.a2.v1
Defline:  (1 of 3) KOG3068 - mRNA splicing factor Genomic Order:  1146
Name:  ? Glyma.09G114600 Secondary Identifier:  ? PAC:30485937
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G114600 0.5kb upstream 0.5kb upstream 2429 true Chr09: 24732776-24735204 Glycine max
Glyma.09G114600 0.5kb upstream 0.5kb upstream 500 false Chr09: 24732776-24733275 Glycine max
Glyma.09G114600 0.5kb downstream 0.5kb downstream 2429 true Chr09: 24733276-24735704 Glycine max
Glyma.09G114600 0.5kb downstream 0.5kb downstream 500 false Chr09: 24735205-24735704 Glycine max
Glyma.09G114600 1.0kb upstream 1.0kb upstream 2929 true Chr09: 24732276-24735204 Glycine max
Glyma.09G114600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 24732276-24733275 Glycine max
Glyma.09G114600 1.0kb downstream 1.0kb downstream 2929 true Chr09: 24733276-24736204 Glycine max
Glyma.09G114600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 24735205-24736204 Glycine max
Glyma.09G114600 2.0kb upstream 2.0kb upstream 3929 true Chr09: 24731276-24735204 Glycine max
Glyma.09G114600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 24731276-24733275 Glycine max
Glyma.09G114600 2.0kb downstream 2.0kb downstream 3929 true Chr09: 24733276-24737204 Glycine max
Glyma.09G114600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 24735205-24737204 Glycine max
Glyma.09G114600 5.0kb upstream 5.0kb upstream 6929 true Chr09: 24728276-24735204 Glycine max
Glyma.09G114600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 24728276-24733275 Glycine max
Glyma.09G114600 5.0kb downstream 5.0kb downstream 6929 true Chr09: 24733276-24740204 Glycine max
Glyma.09G114600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 24735205-24740204 Glycine max
Glyma.09G114600 10.0kb upstream 10.0kb upstream 11929 true Chr09: 24723276-24735204 Glycine max
Glyma.09G114600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 24723276-24733275 Glycine max
Glyma.09G114600 10.0kb downstream 10.0kb downstream 11929 true Chr09: 24733276-24745204 Glycine max
Glyma.09G114600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 24735205-24745204 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303905 5265 Fabidae View MSA
124067488 5270 Rosid View MSA
123737510 5271 Pentapetalae View MSA
122786189 5272 Eudicot View MSA
122043978 5273 Angiosperm View MSA
121345749 5274 Embryophyte View MSA
123424977 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.32385 0.0 14.9521    
cufflinks 4.78728 0.0 13.7058    
cufflinks 4.64631 0.0 13.3565    
cufflinks 5.07362 0.0 14.3748    
cufflinks 6.4647 0.0 17.7845   High
cufflinks 4.20095 0.0 12.1412   Low
cufflinks 5.05481 0.0 14.2543    
cufflinks 4.86645 0.0 13.8994    
cufflinks 5.19952 0.0 14.6987    
cufflinks 4.919        
cufflinks 4.839        
cufflinks 5.013        
cufflinks 5.996        
cufflinks 7.803     High High
cufflinks 3.818       Low
cufflinks 4.538        
cufflinks 5.0        
cufflinks 5.898        
cufflinks 6.128       High
cufflinks 4.135       Low
cufflinks 5.758     High  
cufflinks 4.8        
cufflinks 4.361        
cufflinks 5.667        
cufflinks 3.807       Low
cufflinks 5.013        

0 Strain